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Information for unigene UN14881
FASTA Sequence |
Unigene ID: UN14881 | Length: 967 |
SSR | | GGAAGCGGCTCTTATCGCCGCTAGACACGAAGGAGCTACCGTCACGATGGCGCACTTTGAATCTGCTATTGATCGTGTCATTGGTG
GTCTTGAGAAGAAGAACTGAGTGATAAGTAAGCTGGAGCGTCGTACGGTTGCGTATCATGAATCTGGTCACGCGGTTGCTGGTTGG
TTCCTGGAACACGCGGAGCCATTGCTGAAGGTGACCATCGTGCCACGTGGAACAGCTGCGCTTGGTTTTGCTCAGTACGTTCCTAA
TGAAAACCTTCTCATGACCAAAGAACAGCTCTTTGACATGACTTGCATGACTCTAGGTGGCCGTGCAGCCGAGCAGGTATTGATAG
GAAAGATCTCAACGGGTGCGCAGAACGATCTAGAGAAAGTTACAAAGATGACGTACGCGCAAGTAGCCGTGTACGGTTTCAGCGAC
AAGGTCGGTCTGCTCTCGTTTCCGCCGAGGGATGATGGATACGACTTCAACAAACCGTACAGCAACAAGACCGGCGCGATCATAGA
CGAGGAAGTGAGGGAATGGGTGGGGAAAGCTTACGAGAAGACGGTGGAGCTGATAGAGACGCACAAGGAGAAAGTGGCTGAGATCG
CTGAGCTTCTGCTGGAGAAGGAAGTGCTGCATCAGGATGATCTTTTGAAAGTTTTGGGTGAGCGTCCGTTTAAACCGGCCGAGGTT
ACTAACTATGACCGGTTCAAGTCTGGGTTTGAGGAGAGTGAGAAGGAAGAGTCCTCCACAACGACTGGTGCACCTGTGGTGGATGA
AGGAGCTCCACCGCCGCTTGAGCCTCAGGTGGTTCCTACGTAGGAGAGTGAGTGAGTGAGTGAGTTCCACCTGTTACGATTGTAAA
TTTTTTATTAAGAATGCAATAAAACACAACTTCAACAAACAAAACAAAAACAGTCTCTTGTTCTTCAATGTTGGTTAGTTTTGTTA
TGAATTATTGCTTCTATTAGC
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GenBank top hits (Blast detail) | Score | e value |
XP_002881027 hypothetical protein ARALYDRAFT_344684 [Arabidopsis lyrata subsp. lyrata] | 1296 | 1e-140 |
NP_850129 cell division protease ftsH-3 [Arabidopsis thaliana] | 1292 | 4e-140 |
AAC33234 putative AAA-type ATPase [Arabidopsis thaliana] | 1292 | 4e-140 |
AAL36270 putative AAA-type ATPase [Arabidopsis thaliana] | 1287 | 1e-139 |
BAE98430 AAA-type like ATPase [Arabidopsis thaliana] | 1219 | 1e-131 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q84WU8 Cell division protease ftsH homolog 3, mitochondrial | 1292 | 2e-141 |
Q8VZI8 Cell division protease ftsH homolog 10, mitochondrial | 1197 | 2e-130 |
Q0DHL4 Cell division protease ftsH homolog 8, mitochondrial | 1096 | 8e-119 |
Q8S2A7 Cell division protease ftsH homolog 3, mitochondrial | 1080 | 6e-117 |
Q9Y4W6 AFG3-like protein 2 | 665 | 8e-069 |
TrEMBL top hits (Blast detail) | Score | e value |
B9SYC0 Mitochondrial respiratory chain complexes assembly protein AFG3, putative | 1144 | 4e-123 |
B9IFV8 Predicted protein | 1120 | 2e-120 |
C5YZ91 Putative uncharacterized protein Sb09g022490 | 1100 | 4e-118 |
B8AYZ7 Putative uncharacterized protein | 1096 | 1e-117 |
B9FKL2 Putative uncharacterized protein | 1096 | 1e-117 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT2G29080.1 ftsh3 (FtsH protease 3); ATP-dependent peptidase/ ATPase | 1293 | 1e-142 |
AT1G07510.1 ftsh10 (FtsH protease 10); ATP binding / ATPase/ metalloendopeptidase/ nucleoside-triphosphatase/ nucleotide binding / zinc ion binding | 1198 | 1e-131 |
AT1G50250.1 FTSH1 (FtsH protease 1); ATP-dependent peptidase/ ATPase/ metallopeptidase | 376 | 2e-036 |
AT5G42270.1 VAR1 (VARIEGATED 1); ATP-dependent peptidase/ ATPase/ metallopeptidase | 364 | 6e-035 |
AT2G26140.1 ftsh4 (FtsH protease 4); ATP-dependent peptidase/ ATPase/ metallopeptidase | 313 | 5e-029 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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