Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN14882

FASTA Sequence
Unigene ID: UN14882Length: 1016 SSR 
GGCTCTTCGTTCTTGGCAATGATTTTCGGCTTCAACTAGCTACGGAGCAAAGAATGGTGAAGCGGCGGAGATAGAGAGATCTGTGT
TGTTCTCTTTACATCTCCATAGCTTCTTCATTCATTCAATCTCTCGTTGAACAAATTCGGCTAATCGAGTTAAAAAAAAATGGAGA
CTCTGGCAAGTGATGATGATCCTGGATTGATTGATTCGGGTGTGTATCTAAGGCTAGGGCTTCTTATTGCAGAGAAGGGCAACAAG
CGTTTGCAGAAGAAGCAGCCACCACCCGCACTTCTCTCACGTCTCGCTTCATCTCTCGAGAGATCTATCTCGTCTCCCCCAGAGTC
TGCTGCTGCTGCTGCTGTGACCACCGTCTTTGACGGTAGATCTCCCCCCGAGATCACCATTTCAGACTACTTGACTCGCATTTACA
ACTACTCTCGCTGCAGCCCTTCTTGCTTTGTGGTCGCCTACATCTACATTCATCAGTTTCTCCACCTCACCCGGTCTCACCTCACC
CCTCTTAATGTCCACCGCCTTCTCGTTACAAGTGTCATGTTATCTGCCAAAGTCTTCGATGACAGGTATTACAACAATGCTTACTA
CGCCAGAGTAGGAGGTGTGAGCACGAGAGAGCTCAACAGATTGGAGATGAAGCTCTTGTTCGCCCTTGATTTCAAGCTTCAGGTTG
ATCCTCACACCTTTCACTCCCACTGTTGTCATTTAGAGGAACACAACAGCAGCGACGACGACGGCTTCCACATCGACTGGCCTATA
AAAGAAGCATGCCGACTCAGCAAAGAGTCTTGGCGTAAGGCCACACCAGAGTCTGTCTGCTCTCAAACCACTGCACGCTGATCAGC
GAGGATTTCATTCGCGTGGCAACTGTAAGAATAGGGTTTTTTGGTTTGTGTGTTTTTTGGTAGTGTGATCAATCATTCTTTTGCAC
AATTTGATTCTTGTGAGCAGGCAAAAATTCACAAACCTTTAAATTTTTGTCTAGTATAAAGTTTTTAAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002878497 hypothetical protein ARALYDRAFT_486815 [Arabidopsis lyrata subsp. lyrata]7646e-079
AAM64958 unknown [Arabidopsis thaliana]7503e-077
NP_191871 cyclin-U3-1 [Arabidopsis thaliana]7451e-076
XP_002302113 predicted protein [Populus trichocarpa]5074e-049
XP_002306774 predicted protein [Populus trichocarpa]5022e-048

Swiss-Prot top hits (Blast detail)Scoree value
Q8LB60 Cyclin-U3-17591e-079
Q75HV0 Cyclin-P3-13915e-037
O80513 Cyclin-U4-13711e-034
Q9LJ45 Cyclin-U1-13476e-032
Q9M205 Cyclin-U2-23333e-030

TrEMBL top hits (Blast detail)Scoree value
B9GSN6 Predicted protein5073e-049
B9H885 Predicted protein5021e-048
B7FJ92 Putative uncharacterized protein4643e-044
A9P8H0 Putative uncharacterized protein4634e-044
B9S423 Cyclin-dependent protein kinase, putative4501e-042

Arabidopsis top hits (Blast detail)Scoree value
AT3G63120.1 CYCP1;1 (cyclin p1;1); cyclin-dependent protein kinase7607e-081
AT2G44740.1 CYCP4;1 (cyclin p4;1); cyclin-dependent protein kinase3719e-036
AT3G21870.1 CYCP2;1 (cyclin p2;1); cyclin-dependent protein kinase3476e-033
AT3G60550.1 CYCP3;2 (cyclin p3;2); cyclin-dependent protein kinase3332e-031
AT2G45080.1 cycp3;1 (cyclin p3;1); cyclin-dependent protein kinase3305e-031

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  33%
 
102  33%
 
211  17%
 
111  17%

Unigene MembersMember information