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Information for unigene UN14883

FASTA Sequence
Unigene ID: UN14883Length: 1377  SNP
GGACCTCTTCCTATATAGTTGTAAACTCTACATCCTTAAACAAAAAAAATTCTATTTCGCTTCCTTCTCCTCTGCTTCAAGACCTT
TCTTCACCACCATCATTCCCATTTTACAGATATGGATACCAACCGGAAAGCTCACCCGGATTGCAAATATGCTAAAAACCCCTTCC
ATGAATGTGCTTCTGATTGTATAGAGAAGATTGCTCAAGGCAATGGAAAGAAGAATTCAAAGAAGCAAGCCTCAAAGGTTCTTAGC
CTCCCAGGGAGTTTCGGTAAGAAAAAGTCAGAATCACATCCACCTTCACCTCTTAACTCAAGGCCCTATCAGAACGGTACCGCCAA
TTCTCCAAGAGTTCATCAACCAAGACCTTCATCAGTAGCTGTGAAGAAGACAACGGTTCCAGAAAGTAACAGATCTTTCCCCCTTT
CATCGTCTGATGAGATCTCTGTTAACCTCAATGGTCAGCATGATTTTTACAACCATAAGCCAGAGAAGCCCTTGAAGACGGTTCCA
CTATCCCCAAACAACATGGCTTATCATACCAAAACCGTATCACCAAAGCCTCGAGTGTTTGAACACAACGGCAAGAATGAAGCAGC
CAGTGAGATTAGTGAATTCAATGTTGTAAGCCCTCCAAGGTCTTACGTCAATGATGATGATGAGGATGATGATGATGAGGAAGGTG
TAGAGCTCGACCTTCAGTCTGTTATGTCAGACACATGTGTTTCGGTTGGAAAATACCGTGTGAGCTCTGGTGTCTCCACAATCCTA
CAGTCAATTATCGACAAACACGGAGACGTAGCTGAAAACTGCAGGCTAGAATCAGCATCGATGAGGTCCAGATACCTAGAATGCAT
GTGCTCATTGATGCAAGAACTTGGATCAACTCCGGTCGCGCAGTTGACAGAACTAAAAGTCAAAGAGATGCTTGCGGTTGTTAAGG
ACTTGGAGTCCGTGAACATCGATGTTGGTTGGCTACGTTCTGTTCTTGAGGAGTTTGCTCGGTTTCAAGAGAACGCAGAGTCAGAG
AAAGAGAGACAAGGAGAAACAGTGAGGTCTAAGAAACAAGAATTGGAGATTCATGAAGCAGACTTAGCCAAGATAGAGGAGGAAGC
AAGGGAAGCGAGGTTGAGGGTGGAGGAGATGAAGGCGGAGCTGGCTGAGCTTGAGACAGAGCGGTTGAGGATGGAAGAGATGGGAT
TTAAGGTTGAGAAATTTAAAGGGAGGTCGTTTCTTGATGAGCTTCTTTGATGTTAATTAAACTCACTACTCCAAAAGTATAATGTA
TAAGTTTGATATTTGTTCTTTAACAGTGATTAAAGGTGAACGATATTACAGTTTCTAATGAGTTGATTACTATTCACAGAGGGTAC
T

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002886085 At2g16900/F12A24.8 [Arabidopsis lyrata subsp. lyrata]15435e-169
NP_565397 phospholipase-like protein [Arabidopsis thaliana]15264e-167
AAK63974 At2g16900/F12A24.8 [Arabidopsis thaliana]15264e-167
XP_002867091 hypothetical protein ARALYDRAFT_353319 [Arabidopsis lyrata subsp. lyrata]12093e-130
NP_001078494 phospholipase-like (PEARLI 4) family protein [Arabidopsis thaliana]11798e-127

Swiss-Prot top hits (Blast detail)Scoree value
O94317 Uncharacterized serine-rich protein C215.131372e-007

TrEMBL top hits (Blast detail)Scoree value
Q94BU9 At2g16900/F12A24.815263e-167
Q9ZVX3 Expressed protein15263e-167
A8MQE1 Uncharacterized protein At4g35110.311795e-127
B3H7D4 Uncharacterized protein At4g35110.411795e-127
O49617 AT4g35110/M4E13_16011779e-127

Arabidopsis top hits (Blast detail)Scoree value
AT2G16900.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase-like, arabidopsis (InterPro:IPR007942); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G35110.4); Has 353 Blast hits to 254 proteins in 60 species: Archae - 2; Bacteria - 4; Metazoa - 73; Fungi - 16; Plants - 115; Viruses - 51; Other Eukaryotes - 92 (source: NCBI BLink).15271e-169
AT4G35110.3 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase-like, arabidopsis (InterPro:IPR007942); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G16900.1); Has 491 Blast hits to 408 proteins in 102 species: Archae - 17; Bacteria - 39; Metazoa - 130; Fungi - 34; Plants - 131; Viruses - 35; Other Eukaryotes - 105 (source: NCBI BLink).11802e-129
AT4G35110.4 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase-like, arabidopsis (InterPro:IPR007942); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G16900.1); Has 412 Blast hits to 329 proteins in 86 species: Archae - 13; Bacteria - 24; Metazoa - 97; Fungi - 28; Plants - 128; Viruses - 35; Other Eukaryotes - 87 (source: NCBI BLink).11802e-129
AT4G35110.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase-like, arabidopsis (InterPro:IPR007942); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G16900.1); Has 495 Blast hits to 408 proteins in 102 species: Archae - 17; Bacteria - 39; Metazoa - 132; Fungi - 34; Plants - 131; Viruses - 35; Other Eukaryotes - 107 (source: NCBI BLink).11784e-129
AT4G35110.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase-like, arabidopsis (InterPro:IPR007942); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G16900.1); Has 495 Blast hits to 408 proteins in 102 species: Archae - 17; Bacteria - 39; Metazoa - 132; Fungi - 34; Plants - 131; Viruses - 35; Other Eukaryotes - 107 (source: NCBI BLink).11784e-129

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  17%
 
201  8%
 
92  17%
 
191  8%
 
84  33%
 
102  17%

Unigene MembersMember information