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Information for unigene UN14915
| FASTA Sequence |
| Unigene ID: UN14915 | Length: 1157 |
SSR | SNP | GGACACACCGCTACTCAATTCAGACAAACTCCATAGCTAATCTAGAGAGAGAGAGAAAATATGTCGAAAGAAGTGAGTGAAGAGGG
ACAAACAACACACAGCCATGGAAAAGACTACGTGGATCCTCCACCAGCTCCCCTTCTCGACATGGGAGAGCTCAAGTCTTGGTCTT
TCTACAGAGCTCTCATCGCCGAGTTCATCGCCACCCTCCTCTTCCTCTACGTCACCATAGCCACAGTCATCGGCCACAAGAAACAA
ACCGGTCCTTGTGACGGCGTTGGTTTACTCGGTATCGCTTGGGCCTTCGGTGGTATGATCTTCGTCCTCGTCTACTGCACCGCCGG
CATCTCTGGTGGTCACATTAACCCAGCTGTGACTTTTGGTCTGTTCTTGGCACGTAAGGTGTCTTTGGTGAGAGCTGTTGGTTACA
TGATAGCCCAGTGTCTTGGAGCCATTTGTGGTGTGGGTTTCGTGAAAGCTTTCATGAAGACTCCTTACAACACTCTCGGTGGCGGA
GCTAACACTGTCGCCCCTGGTTACAGTACAGGAACTGCCCTCGGAGCTGAGATCATCGGAACTTTCGTCCTCGTTTACACCGTCTT
CTCTGCTACCGACCCTAAGAGAAGCGCTCGTGACTCTCACATCCCCGTTTTGGCTCCACTTCCAATTGGATTTGCTGTGTTCATGG
TGCATTTGGCAACCATCCCCATCACTGGAACTGGAATTAACCCAGCGAGAAGCTTTGGTGCTGCTGTTATCTACAACAACGAGAAG
GCATGGGATGACCATTGGATCTTCTGGGTTGGGCCATTCGTTGGAGCATTAGCAGCAGCAGCTTACCATCAATACATTTTGAGAGC
TGCAGCAGTTAAGGCCTTGGCCTCGTTCCGAAGCAGTGCAACCAACTGATGAATGGTGAAGAAAAAAGCTTAAGATTCGTTATGCT
TTTTATTTTTATTTGTTGCTTTATTTGTGTGGTTAATGAGAGAGAGCTTAAGTTGGTGGATTGATGATTAATGTTAATTATGAAAT
GGGTGTATGAATTTTTCTTTCTTTCTTTTTCTACCCACTTTGTTAGCTTTTTCAATATCTAGTTTAGTTTGGTGTGACTTGTGAAT
CATTTTCCTTTCTTAGTTATTATCATTTTCTCTCTAAAG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAG30607 aquaporin [Brassica oleracea] | 1425 | 2e-155 |
| NP_195236 aquaporin PIP2-7 [Arabidopsis thaliana] | 1391 | 2e-151 |
| AAB65787 plasma membrane intrinsic protein [Arabidopsis thaliana] | 1376 | 9e-150 |
| AAB36949 plasma membrane intrinsic protein PIP3 [Arabidopsis thaliana] | 1376 | 9e-150 |
| XP_002869108 hypothetical protein ARALYDRAFT_491143 [Arabidopsis lyrata subsp. lyrata] | 1375 | 1e-149 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P93004 Aquaporin PIP2-7 | 1391 | 7e-153 |
| Q9ZVX8 Probable aquaporin PIP2-8 | 1333 | 4e-146 |
| P42767 Aquaporin PIP-type | 1273 | 3e-139 |
| Q7XLR1 Probable aquaporin PIP2-6 | 1202 | 6e-131 |
| Q9ATM4 Aquaporin PIP2-7 | 1138 | 1e-123 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FUC0 Aquaporin | 1425 | 1e-155 |
| C0SVL5 Putative uncharacterized protein At4g35100 (Fragment) | 1391 | 1e-151 |
| Q5DVT5 Plasma membrane intrinsic protein 2;5 | 1325 | 5e-144 |
| A9PG56 Aquaporin, MIP family, PIP subfamily | 1321 | 1e-143 |
| Q70AP3 Aquaporin | 1317 | 4e-143 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G35100.1 PIP3 (PLASMA MEMBRANE INTRINSIC PROTEIN 3); water channel | 1392 | 5e-154 |
| AT2G16850.1 PIP2;8 (PLASMA MEMBRANE INTRINSIC PROTEIN 2;8); water channel | 1334 | 2e-147 |
| AT3G53420.1 PIP2A (PLASMA MEMBRANE INTRINSIC PROTEIN 2A); water channel | 1125 | 4e-123 |
| AT3G53420.2 PIP2A (PLASMA MEMBRANE INTRINSIC PROTEIN 2A); water channel | 1125 | 4e-123 |
| AT5G60660.1 PIP2;4 (PLASMA MEMBRANE INTRINSIC PROTEIN 2;4); water channel | 1117 | 3e-122 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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