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Information for unigene UN14946

FASTA Sequence
Unigene ID: UN14946Length: 1259 SSR 
GGATTCTCTAACATCATCAATCTTCCTTCGTTTGTTTGTTTGTTTCTTTCTCTCTCTCTCTATTGGTTCTTGAGAGACATATCCGT
GGACCTCAAAAAATAAAGAGGATCTAGTAAAAATGGGGTTATATTCTCTAATCACAGGGAGAAGAGGACCAAGTGGGTTTGGTTCA
GCTTCAACAGCCGAGGAGGTTACTCAAGGGATTGATGCAACTCATCTCACTGCAATTATCACAGGAGGGACAGGAGGAATAGGAAT
GGAGACAGCAGGAGTAATGGCACAGAGAGGTGCTCATGTGGTGATTGGTGCCCGAAACATGGGAGTTGCAGAAAAGGCCAAAACTG
AGATTCTCAGACAAAACGCAAACGCACGTGTCACACTGATCCACTTAGATCTCTCTTCCTTCAAATCCATCAAAGCCTTTGTTCGC
GACTTTCATGCCCTCCATCTTCCTCTCAATATCCTCATAAACAATGCAGGAGTTATGTTTTGTCCATACCAACTCTCTGAAGATGG
AATCGAACTGCAGTTTGCTACAAATCACATGGGTCATTTTCTTTTGACAAACTTGCTCCTAGACACAATGAAGAACACTGCAAAAA
CCAGTGGTGTTGAAGGAAGAATTTTGAATCTATCATCTATAGCTCATATCTACACTTACCAAGAAGGAATCCAATTCGACAGCATC
AATGACATCTGCAGTTACTCGGATAAAAGAGCTTACGGCCAATCGAAACTAGCAAATATATTGCACGCAAATAAGCTCTCGCGTCA
ACTTCAGGAAGAGGGAGTGAACATAACAGTGAATTCAGTTCACCCCGGTCTCATCCTCACCAATCTCTTCCAACATACAGCTCTTT
TAATGAGGTTTTTGAAGTTCTTCAGCTTCTACTTGTGGAAAAATATACCCCAGGGAGCAGCTACAACATGTTATGTTGCTCTTCAC
CCAAGTCTGAAGGAGGTAACAGGAGAGTACTTTGCAGATTGCAATGAAGTTACTCCAAGCAAACTTGCTAGAGATGAGACTTTGGC
ACAAAAGCTCTGGGATTTCAGCGTTAAGCTAATCAACTCTGTCTCTAAAAAGAACTACCTTGGTTTCGAAGACACAAGTTAATGAT
TAACAAGAAGAATCTCTTGTTGTCGCGAAAATGTGTGAGATATGATTGTGATGTTTTAAACAAAAAAAAAAGTTATCAAGTGAATA
ACTGATGTTAAGCGTGATATTCATAGCATGTGCAATAAAAAATGGTTGTTATTAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_568102 Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana]16062e-176
AAM13049 putative protein [Arabidopsis thaliana]16001e-175
AAM63701 putativepod-specific dehydrogenase SAC25 [Arabidopsis thaliana]15954e-175
XP_002870978 short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata]15954e-175
XP_002309049 predicted protein [Populus trichocarpa]12155e-131

Swiss-Prot top hits (Blast detail)Scoree value
Q9ERI6 Retinol dehydrogenase 145118e-051
Q9HBH5 Retinol dehydrogenase 145091e-050
Q8NBN7 Retinol dehydrogenase 135037e-050
Q8CEE7 Retinol dehydrogenase 134992e-049
Q8N5I4 Dehydrogenase/reductase SDR family member on chromosome X4841e-047

TrEMBL top hits (Blast detail)Scoree value
Q8RWJ2 Putative uncharacterized protein At5g0254016007e-176
Q8LCE7 Putativepod-specific dehydrogenase SAC2515953e-175
B9HBK4 Predicted protein12153e-131
Q7DM16 Putative pod-specific dehydrogenase SAC2511732e-126
P81259 Sequence 6 from Patent WO942304311732e-126

Arabidopsis top hits (Blast detail)Scoree value
AT5G02540.1 short-chain dehydrogenase/reductase (SDR) family protein16076e-179
AT2G37540.1 short-chain dehydrogenase/reductase (SDR) family protein11613e-127
AT4G23420.1 short-chain dehydrogenase/reductase (SDR) family protein9392e-101
AT4G23420.2 short-chain dehydrogenase/reductase (SDR) family protein9392e-101
AT4G23430.2 short-chain dehydrogenase/reductase (SDR) family protein9122e-098

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  20%
 
122  40%
 
61  20%
 
81  20%

Unigene MembersMember information