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Information for unigene UN14954

FASTA Sequence
Unigene ID: UN14954Length: 1504  SNP
GGATGCTCCTGCACCTAGCAGAAGCAAGTCGGCATTTTGGCTGTACAGAGATATTCAGGGAACCCTCAAAATTCGCTTTATCTGAT
TGCTATGAAGAACATTTCCTTGTTCCATACAAACGCATTGTCATTGTGACAAACAAGAGGGTTGTGCTATTGCGGTGCTCTGATAT
GGATAAGATGGATAAGAAACCCAGCAAGATCATGTGGGATGTGCCTTGGGAGGAACTTATGGCGTTGGAATTGGCAAAGGCAGGTG
GCCAAAGGCCCTCGCATCTCATACTGCATCTGAAGACCTTTCAGAAGTCAGAGAGCTTTGCTCAGGTTATTAAGTGCAGCGTGTCG
GAAGAATCAGATGTACTAGAACCCCAAGCTGTTCGAATTTGTTCAGTAGTGCGAAAAATGTGGAAAGCATATCAGTCCAACATGAA
AAATCATGTTCTCAAGGTTCCTTCAAGCCAGAGACATGTGTATTTTGCTTGGAATGAGGCTGATGGGAGAGACTCGAAATCGTACA
GCAACAAGGCTATTATAAAATCGAGAGAACTTTCTTCTTCCTCAAGTTCTGTCTCGGATGATAGGAAGTTTGTCAAACATACTATC
AATTTCTCAAAAATCTGGAGTAGCGAGCGAGAATCCAAAGGTCGATGTACTCTGTGCAAAAAGCAGGTTTCTGAAGATGGAGGAGT
GTGCACTATCTGGAGACCCAGTTGTCCAGAGGGATTTGTGTCAGTGGGTGATGTAGCTCATGTTGGTAGCCATCCTCCAAATGTTG
CTGCTGTTTACAATAACACCGACGGAGTGTTTGCACTTCCAGTGGGTTATGACCTCGTGTGGAGGAACTGCTTAGATGATTACGTA
AGTCCTGTGTCGATCTGGCATCCTCGGGCTCCTGAAGGATTCGTATCTCCTGGATGCGTTGCAGTTGCTAGTTTCAAGGAGCCAGA
GCCCAACACAGTGTATTGCATGCCGACGTCTCTGGCTGAGCAGACGGAGTTTGAGGAACAGAAGGTTTGGTCGTCACCTGACTCGT
ATCCGTGGGCATGCCACATATACCAGGTTAGAAGTGACGCACTACACTTCATGGCTCTGAGGCAAACCAAAGAAGAGTCTGATTGG
AGAGCCATTAGAGTTCGAGATGATTACAGATCCATGGAATCTGAATCTGCAAGGAATCTGCGTATAGAATGAATCTTTTCCACACA
TTTTCGTTTGCTTTTGGGAAGAAGATTATGCTTCTTGTAAAGATCTAGACTTTGCAAAACAGGGAGAGGTTTCTGTGTTCTTTTTT
CCTTTTGGGGTTTTCGTCAAAGATAGCTTTTGCGTTGATCTGTTTAAAATTTGTGTGTATAACAGAGTTAGGCATTCTCGGAAGGA
TCTATCTGTACACTTTGCTCTTTGTTACAAAACCCAAATGTTTTTGAGTTTTTTTCTCAAACATGAATGCTTCTCATCTTTTACAT
TTGAGTTTCTTTTAATAATAAGAAGAATCCTTTGTTTTTGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002868083 hypothetical protein ARALYDRAFT_355042 [Arabidopsis lyrata subsp. lyrata]19584e-217
NP_193447 pleckstrin homology (PH) domain-containing protein [Arabidopsis thaliana]19396e-215
NP_001154245 pleckstrin homology (PH) domain-containing protein [Arabidopsis thaliana]19396e-215
NP_001190747 pleckstrin homology (PH) domain-containing protein [Arabidopsis thaliana]19396e-215
AAV68872 hypothetical protein AT4G17110 [Arabidopsis thaliana]17131e-188

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q5Q0B5 Putative uncharacterized protein17137e-189
O23556 Putative uncharacterized protein AT4g1711016331e-179
B9MTV9 Predicted protein15802e-173
Q56YA8 Putative uncharacterized protein At4g17110 (Fragment)15481e-169
B9RUS0 Vacuolar protein sorting-associated protein, putative15131e-165

Arabidopsis top hits (Blast detail)Scoree value
AT4G17140.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: phosphoinositide binding (TAIR:AT1G48090.2); Has 1924 Blast hits to 1182 proteins in 161 species: Archae - 0; Bacteria - 16; Metazoa - 911; Fungi - 304; Plants - 271; Viruses - 0; Other Eukaryotes - 422 (source: NCBI BLink).19402e-217
AT4G17140.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: phosphoinositide binding (TAIR:AT1G48090.2).19402e-217
AT1G48090.1 phosphoinositide binding1793e-013
AT1G48090.2 phosphoinositide binding1372e-008

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  25%
 
82  25%
 
62  25%
 
112  25%

Unigene MembersMember information