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Information for unigene UN14971
| FASTA Sequence |
| Unigene ID: UN14971 | Length: 1619 |
SSR | | TGCAGATAGTTACTACGTTGATACACGGAGCTGGTGTGGTGAGGAATAAGGTGAAAGCGCGCCAGCTGTTCGATGAAATTCCTGAG
AGAGGGTTGAAGTGTGATTGCGGAGCTTATAACGCTTTGATGAGTGCTCTCATGAGATGCGGAGACGTGAGTGGTGCGGTTCAGGT
GATGAAGGAGATGGAAGAGAATGGGGTTGAGGCTGATAGTGTGACTTTTCACTCCGTGTTTATCGGAATGATGAAGTCTAAAGAGT
TTGGGTTCGACGGTGTGTGTGAGCTTTACCAGAAGATGAAGGGAAGGTCTCTGGTTCCGAAAACACCGACCGTTGGTTTTGCTGAT
GAAGCTGTTCTGTCAGAACGGTGAAGTTAACTTGGGACTAGATTTGTGGAAGTATATGCTGGAGAAGGGGTACTGCCCTCATGGCC
ACGCGTTGGAACTTCTTACAACTGCACTCTGTGCTCGGAGAAGAGCTAACGATGCTTTTGAGTGCTCGAGGCAGACGGTGGAGAGA
GGAAGGTGCGTGAGCGAACCAGTGTTCAGAATGTTAGAGACCTCCTTATCAAGCAAAGGCGAACTGGAGAAGCTAGAGGAACTCAA
GAGGAAGATACAGAAACTGCATAGCTTTTTGCCGCCTCCTGGAACACAGTTAATTTAGAAGGTAACTTCAGTGTAATCGGTTTTCG
TGTATGTGTTCAATTGTATACAACAATGTAGTAATTTTTGATAGAAGATCAAACTTAGCTGATGATGATGATGAAGTTTTGTTTAA
AGTGTTGTTTCTATACATTGTATAAACGTCAAAGCTAAACTAAGATCTATACCGACCATTTGGTGAGTGCTTGAATTCATGAAGCT
TTATCTTTTCAACGATCCGGTTGCGTATGATAGTCTCAGATTTAACAGCTTCTTGGATGTTACTATGCACAAGATCACAGAGCTCG
TCTAAGGCCAGCATAGGGAATGGCTCTTCTATAAGAACACCCACTTCTTCAATGCAGAAGAGAGAAGCAGCACTGATGAAAGTAGC
AGGAACAACAATCCAATGGCATTCATCCCAGAGAATGATTGGTAGAGTTAGATGCCAAAAGACTAAAAACCTCGGGGGTTAAGCGT
GTGTAAGCGAGAGGAATAGGTATGCCCATTAGCTGTTCACACACACCAATGCCTTCGTGTAAGTGTAGCATCTTTGATTCCACAGA
TCTCTCTTTGTATCCTCCAGTTTAAGCAGCCAGGCTCTGAGAAATGAACTCTATCACACAACGTGGACGATGCTTAGATTCAAGAA
TCAGAGACAAATCATCAGCTTCAACCAAGCTCTGGAGATCTCTCGCGACATCTGAACCATAAGTAACATGACACTTAAGAGCCACA
GGGAAAGCTGCAACGTAACGAAGAAGCAAATTTTTAATAACCAACTCATCACCAGAGCCATCAACCGAACATATCACCTGCCTAGC
TAAATCATCAGTGCCAGCAATGATCCCAACCCAAGCTTTCCTCCCTTCTTCATACCTAGAATACGAAGCTTCCGTGCGGAACACGA
GAAGCAGAGCTAAAGCAGGAGCCGTGAGCTGATACGGCAGAGAAGAGGATCTGAGGATGGGGAAGATGCCG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| CAB71062 putative protein [Arabidopsis thaliana] | 733 | 5e-075 |
| NP_191691 Bestrophin-like protein [Arabidopsis thaliana] | 733 | 5e-075 |
| BAF02248 hypothetical protein [Arabidopsis thaliana] | 733 | 5e-075 |
| XP_002876606 hypothetical protein ARALYDRAFT_907660 [Arabidopsis lyrata subsp. lyrata] | 733 | 5e-075 |
| NP_182111 Bestrophin-like protein [Arabidopsis thaliana] | 634 | 1e-063 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9M2D2 UPF0187 protein At3g61320, chloroplastic | 733 | 2e-076 |
| O80832 UPF0187 protein At2g45870, chloroplastic | 634 | 6e-065 |
| Q9M2C8 Pentatricopeptide repeat-containing protein At3g61360 | 513 | 7e-051 |
| Q8YSU5 UPF0187 protein alr2987 | 185 | 7e-013 |
| Q9LQ16 Pentatricopeptide repeat-containing protein At1g62910 | 141 | 9e-008 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WKV9 Putative uncharacterized protein At3g61320 (Fragment) | 733 | 3e-075 |
| B9RDQ9 Putative uncharacterized protein | 609 | 8e-061 |
| B9I8I3 Predicted protein (Fragment) | 584 | 6e-058 |
| B9MUD6 Predicted protein | 340 | 1e-029 |
| A2XBI8 Putative uncharacterized protein | 338 | 2e-029 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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