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Information for unigene UN14979

FASTA Sequence
Unigene ID: UN14979Length: 1269 SSR 
AGACGCAGATAGATGACCTGAAGCTGGTGATCAAAGCGACGAGCGAGAAGTACGAGAACATGCTGGAGGAAGCGAGGCACGAGATC
GACGTGCTCGTGAGCGCGGTGGAGCAGACCAAGAAACACTTCGAGGGGTCGAAGAATGAGTGGGAGATGAGAGAAGCGAGTCTGGT
GAGCCACGTGAAGAGAATGGAGGAGGAGGTTGCTTCCAAAGGGAAAGAGATGAGTAGGTTGGATAACTTGCTGAAGAGAACCAAGG
AAGAAGCTGAGGCGGCTTGGAAGAAGGAAGCGGAGACGAAAGATAGTTTGAAAGAAGTGGAAGAGGAGGTGGTTTATCTTCAGGAG
TCTCTTGGTGAGGCGAAGGCAGAGAGCGTGAAGCTGAAAGAGAATCTGTTGGATAAAGAGAGAGAGTTTCAAAGCGTGGTTCACGA
GAACGAGGATCTGAGGGCGAAGGGAGATGCTTCTCTGAAGAAGATAGATGAGTTATCGAAGTTACTAGAGGAAGCAAGATTGGCCA
AGGAGGAGGTGGAGGAGCTCAGTGAAACTGAAAAGGACTATGATTTGCTACCGAAAGTGGTTGAGTTCTCTTCTGAGAACGGTCAT
AGAAGTGTAGAAGAGAAGTCTCCTAAAGTCAAAACCATTGACGAGGAAGCTCCAGAAAAACAACATATCATCAGCAATGGAAATGG
TATGGAGGGGGAAGACATGAATGGGAAACCAAGGGAGAAGAAAGAAGAAGAATCTCAAGCTGATGATGATGATGATGACAAGGGAT
GATTCGGTTAAAGTTATGTTCAAAATGTGGGAAAGTTGCCAAATCGAGAAGAAAGAAGCGTTTCCCGACAAGAATATTCCACTAGA
GACTCAAGAAGAAGAGGAAGAAGATTCAAGCAAAATGGATGAAAACGATAAAACCTCAACAGAGAACAACGTAGATGAAATCGGAA
CCGAAGATCAGCTTGTGATGGAGAAGAAACTCAAGAAGAAGAAGACTTTACTTGGTAAAGTTGGCAACCTTCTCAAGAAGAAAGCA
CCTGTGAACCCAAAATAACACTTTTTGGGGAGGTAAGGGAAATCATTAAGCTTATATATATAGAAGAAACATATTTGTCTCTGTAT
ACTTCATCAGTGTTCTTTATATATATCTTTGTTGATTTCTGATTCTTTTTTTTGTTAATGTAAAGGTTTGTGTGTTTATGTGATGA
TAGACTTGTGTGTTGAACTGGAATCTTTTTTGGTTCACTTTTTAAACTGAAGAAACTTTTCATGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_197175 uncharacterized protein [Arabidopsis thaliana]10013e-106
XP_002871734 hypothetical protein ARALYDRAFT_488531 [Arabidopsis lyrata subsp. lyrata]9556e-101
NP_186943 uncharacterized protein [Arabidopsis thaliana]7836e-081
NP_001189797 uncharacterized protein [Arabidopsis thaliana]7836e-081
XP_002882261 hypothetical protein ARALYDRAFT_896273 [Arabidopsis lyrata subsp. lyrata]7692e-079

Swiss-Prot top hits (Blast detail)Scoree value
Q14203 Dynactin subunit 11363e-007
O08788 Dynactin subunit 11363e-007
O94317 Uncharacterized serine-rich protein C215.131344e-007
P28023 Dynactin subunit 11282e-006
A3LYI0 Stress response protein NST11273e-006

TrEMBL top hits (Blast detail)Scoree value
Q9LFE4 Putative uncharacterized protein F5E19_7010012e-106
Q9M8T5 F13E7.12 protein7834e-081
B9S250 ATP binding protein, putative6052e-060
B9I744 Predicted protein (Fragment)5971e-059
B9IPH4 Predicted protein5943e-059

Arabidopsis top hits (Blast detail)Scoree value
AT5G16730.1 LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Spectrin/alpha-actinin (InterPro:IPR018159); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02930.1); Has 241703 Blast hits to 112530 proteins in 2711 species: Archae - 2642; Bacteria - 41887; Metazoa - 104467; Fungi - 18239; Plants - 8786; Viruses - 1373; Other Eukaryotes - 64309 (source: NCBI BLink).10011e-108
AT3G02930.1 unknown protein7832e-083
AT1G65010.1 unknown protein4274e-042
AT4G27595.1 unknown protein3692e-035
AT4G40020.1 unknown protein2123e-017

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
211  20%
 
82  40%
 
101  20%
 
111  20%

Unigene MembersMember information