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Information for unigene UN15035

FASTA Sequence
Unigene ID: UN15035Length: 1643 SSR 
TTTTTTTTTATTGTAAACTCTTTACTTTGTAACAAAATGTGTTTTGTAAATTAGCAAACAAAAAAGAGTTTTGGATTTTGGGGGTA
AAAAAATCCATTTATATTTAATTTATGGGTTAATAAAAAATCATAAAATAGTAAGAGGACGTGTGAAGAAGGAACAAGCCAGAAGC
TACAGCCAACCTACACAGTGTCGAAAAGATCAAAACTTTCTCAGCCGTTAGATCTTCATTTCATCTCTCTTGATTCTTCTCCCTCT
CACTCTCTCTCTCTGCCATCTGACCAGTGGGTTTGCAGATATTCAAACAACTCACCCCCCTTTTACTCGCCTCTCTCTCCGATTCT
CCAGAGCCGATTAGGGTTTCTGGATTCCGATTGAAAAACCGTTCCTTTTCCTCGATTCCAGCGGATTGAGTGTGCAATCCATCCTC
ACCCTGAAAAGGTAGCAGAGAAACGAGGTGGAGGATGACGGATTCGAGCGCGGCGATGCCGTTGGAGATGGCACAAATCTTCGCGA
CGGCTACGACGAATTGGTGGGACGAGGTGAACGAGTCAACTCAGTGGCAAGATGGGATCTTCTTCTCTCTCTGTGGAGCTTATGCT
CTTGTCTCAGCCATCGCTCTCGTCCAATTGGTGAGGATCCAAATGAGAGTGCCTGAGTATGGCTGGACCACTCAGAAGGTGTTTCA
TCTTATGAACTTTGTCGTCAATGGAGTTCGTGCGGTTCTATTTGGATTTCACCATCAAGTCTTTCTCGTGCATCCCAAGGCTCTTT
GCTGGATATTATTGGATCTTCCGGGCCTCCTCTTTTTCTCGGCATACACCCTGCTTGTTCTCTTCTGGGCTGAGATATATCACCAG
GCAAGAAGTTTACCAACTGATAAACTGCGGATAACATATATTGCAGTCAACGTGGCTGTATATTTGGCTCAGGTTGTTATTTGGGT
ATGCATCTGGGTGAATGATAACAGCACTGTGGAACTAGTTGGGAAGATATTTATGGCAGTTGTGTCTTTCATCGCTGCTTTAGGCT
TCTTGCTTTACGGAGGAAGATTGTTTATTATGCTGAGAAGGTTCCCTATTGAATCAAAAGGAAGAAGGAAGAAGCTCCATGAGGTT
GGATCTGTGACAGCGATATGCTTCACCTGCTTCCTCATAAGATGCATTGTGGTGGGTGTATCAGCTTTTGACAGAGATCTAACGCT
GGATGTTCTTGATCATCCAGTTCTGAACTTAATCTACTATATGGTGGTAGAAGTACTTCCATCGGCACTAGTGCTCTTCATCCTCC
GGAAGCTACCTCCAAAGAGAGTATCAGCTCAGTACCATCCTATCCAGTAGACTTTTTTTTAGCTGAAGCCATCACACGGCGACTCT
GATGATGTTGCAAGAGAGACAGTAAAGATTCAGTAAAGAAAATATGGTCAGGACAAGAATTTTTAAGAGTTGCTGGCGGATGTTTG
ATTGTCATGTTATGTCTGGTTGAAAATAATAACCAATTGTTTTACCTTTTTTTTTTTTTCTGTTTCGCAGATGACACACTGTTCTA
ACCATCTTAAACCGAGCATTGGGTATCATATGGACGGTTAAATAACTTAACGGGCCTTGGGCTGATCAATCAAGGCCTTATCTCCG
TTATTCTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_567636 tobamovirus multiplication protein 1 [Arabidopsis thaliana]13931e-151
XP_002869863 hypothetical protein ARALYDRAFT_492696 [Arabidopsis lyrata subsp. lyrata]13931e-151
XP_002304922 predicted protein [Populus trichocarpa]12238e-132
BAE43836 tobamovirus multiplication 1 [Nicotiana tabacum]12192e-131
BAE43840 tobamovirus multiplication 1 homolog 3 [Solanum lycopersicum]12084e-130

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9FEG2 Putative uncharacterized protein At4g2179013931e-151
B9H1D8 Predicted protein12235e-132
Q402F4 Tobamovirus multiplication 112192e-131
Q402F0 Tobamovirus multiplication 1 homolog 312083e-130
D5A9D2 Putative uncharacterized protein11142e-119

Arabidopsis top hits (Blast detail)Scoree value
AT4G21790.1 TOM1 (TOBAMOVIRUS MULTIPLICATION 1); protein binding13944e-154
AT2G02180.1 TOM3; protein binding9276e-100
AT1G14530.1 THH1 (TOM THREE HOMOLOG 1); virion binding9016e-097
AT1G14530.2 THH1 (TOM THREE HOMOLOG 1); virion binding9016e-097

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
103  30%
 
121  10%
 
94  40%
 
72  20%

Unigene MembersMember information