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Information for unigene UN15077

FASTA Sequence
Unigene ID: UN15077Length: 911 SSR 
GGATACTAAATTGGCATATGCAGAGCATCCCACCGCACGAGCTCTTTGGTGTTCTATCATCTCTCCACACTTTGCTTCGATTTCTC
TGCAATATTAAAACACTTTTTTTTTGTTGGTTTCATCTCAAGCTTCCAACTTGGGCCGTTATTTAATTGAGTTTCTCGTGTTCTGA
TTTTGAACTTGAAAAAAGAGTTTAATTTTGGGAGAAAGGAGAAGATGATGAAAGGTCTCTGAGTGTGTGTGTGTGAGCTAGGGTTA
AGTGTGATTCTAAGTTGTGTAAAGAAAGAAGGGGGGAGTTTTGATGGCGGCGGAGCTTGAATGTTGCGAGGCGAACTTCTTCATAC
ACATAGCGGTGATAGCGTTTCTGGTCTTGTTCGCTGGACTCATGTCTGGTTTGACATTGGGTCTTATGTCCTTGAGTCTCGTTGAT
CTCGAGGTTCTCGCTAAATCCGGTACTCCCCAGCATCGCCAATACGCTGAAAAGATATTGCCAGTGGTGAAGAATCAGCATCTGTT
GCTTGTCACTTTACTTGTATGCAATGCAGCTGCTATGGAGACGCTTCCTATTTTTCTTGATTCTCTTGTCACGGCTTGGGGTGCCA
TTTTGATCTCAGTTACATTGATTCTTCTCTTTGGTGAGATTATACCTCAGTCAATTTGTTCACGTTATGGTTTGGCCATTGGTGCA
ACAGTGGCTTCCTTTGTCCGTGTCCTAGTCTTTGTCTGCTTACCAGTTGCATGGCCGATTAGCAAGCTGCTGGACTTTCTATTGGG
TCACCGTCGTGCAGCGCTGTTTCGAAGAGCTGAGCTGAAAACACTTGTAGACTTTCATGGAATGAGCTAGAAAGGGCGGAGAGTTG
ACTCATGACGAACGACATCATTGCAGAGCTCTTGAACTCTCTGATAAATGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_195096 CBS domain-containing protein [Arabidopsis thaliana]8335e-087
BAH56773 AT4G33700 [Arabidopsis thaliana]8335e-087
XP_002867162 CBS domain-containing protein [Arabidopsis lyrata subsp. lyrata]8335e-087
NP_179058 CBS and transporter associated domain-containing protein [Arabidopsis thaliana]7701e-079
XP_002298798 predicted protein [Populus trichocarpa]7602e-078

Swiss-Prot top hits (Blast detail)Scoree value
Q12296 Protein MAM33556e-033
Q9USJ3 Uncharacterized protein C4B3.03c3432e-031
Q69ZF7 Metal transporter CNNM43135e-028
P0C588 Metal transporter CNNM43126e-028
Q6P4Q7 Metal transporter CNNM43091e-027

TrEMBL top hits (Blast detail)Scoree value
C0Z244 AT4G33700 protein8334e-087
Q8VZI2 AT4g33700/T16L1_1908334e-087
B9GIP7 Predicted protein7601e-078
B9S7T8 Putative uncharacterized protein7456e-077
A5BCY3 Putative uncharacterized protein7412e-076

Arabidopsis top hits (Blast detail)Scoree value
AT4G33700.1 CBS domain-containing protein8332e-089
AT2G14520.1 CBS domain-containing protein7704e-082
AT5G52790.1 CBS domain-containing protein-related5851e-060
AT1G47330.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF21 (InterPro:IPR002550), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: CBS domain-containing protein (TAIR:AT2G14520.1); Has 6970 Blast hits to 6717 proteins in 1361 species: Archae - 64; Bacteria - 4382; Metazoa - 390; Fungi - 183; Plants - 125; Viruses - 0; Other Eukaryotes - 1826 (source: NCBI BLink).5707e-059
AT1G03270.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF21 (InterPro:IPR002550), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14240.1); Has 6515 Blast hits to 6357 proteins in 1347 species: Archae - 64; Bacteria - 4189; Metazoa - 291; Fungi - 188; Plants - 123; Viruses - 0; Other Eukaryotes - 1660 (source: NCBI BLink).5043e-051

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  67%
 
121  33%

Unigene MembersMember information