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Information for unigene UN15078
| FASTA Sequence |
| Unigene ID: UN15078 | Length: 819 |
SSR | | GGGAGATTCTCCTTCATTTCTGCTACGAAATTTTCTTATATATTAAAAACCATTTTTGATATTTTACTTTTTTTGCTATCTACTGA
GAGAGAGAGATAAAATGAGAGGTATAGCCACAAAGATCTCCGGCGTTGCTCCGTTGTTTTTGCTATTCATCGCCGGGGCAGTCTCC
GCCTTTGAGGATATCGAAAAGTTAAGGATTTGGCCGTTACCGGCGGAAGTTAGCTACGGTGGCCGGAGAATGTATTTAAGCGAAGA
TTTCAAGCTTGTGACGGAGGGAAGCAAGTACGAGGATCCTTCAGCGATTTTGAAAGAAGGATTCGATAGAATGTTTGCAGTTGTGA
GGTTGAGCCACGTCGTCTCCGGCCACCGGAACTCTTCAGGCTCCGACGGATCTGATCTGCTTCAGGGACTCCACGTCATCATATCT
TCCTCCACCGATGAGTTGGAATATGGAGCAGATGAATCGTACAGATTAGTGGTTGCATCCCAAGGGAAGCCGTCGTATGCACAACT
TGAGGCAAAAAGCGTTTACGGTGCATTGCACGGCCTACAGACATTCAGCCAGTTATGCCATTTTAATATGAAGAAAAAGGTGATAG
AAGTTTTAATGACTCCATGGAATATCACAGACCAGCCCAGATTCTCTTACCGTGGTCTTTTGATCGATACATCCCGACATTATTTG
CCACTACCTGTTATGAAGAACGTAATTGATTCCATGACATACACCAAGCTAAATGTGCTTCATTGGCACATTGTGGACACACAGTC
ATTTCCCTTGGAGATTCCTTCGTATCCAAAGCTATGGAATGGCGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_176737 beta-hexosaminidase 3 [Arabidopsis thaliana] | 1095 | 2e-117 |
| XP_002886950 glycosyl hydrolase family 20 protein [Arabidopsis lyrata subsp. lyrata] | 1093 | 3e-117 |
| XP_002268354 PREDICTED: hypothetical protein, partial [Vitis vinifera] | 720 | 6e-074 |
| XP_002514769 beta-hexosaminidase, putative [Ricinus communis] | 689 | 2e-070 |
| AAT77374 putative beta-N-acetylhexosaminidase [Oryza sativa Japonica Group] | 682 | 1e-069 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q54K56 Beta-hexosaminidase subunit B2 | 366 | 3e-034 |
| Q54K55 Beta-hexosaminidase subunit B1 | 304 | 4e-027 |
| P20060 Beta-hexosaminidase subunit beta | 304 | 4e-027 |
| P49614 Beta-hexosaminidase subunit beta | 288 | 3e-025 |
| Q54SC9 Beta-hexosaminidase subunit A2 | 284 | 9e-025 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8L7S6 At1g65600/F5I14_13 | 1095 | 1e-117 |
| B9RM00 Beta-hexosaminidase, putative | 689 | 2e-070 |
| B8AYA3 Putative uncharacterized protein | 682 | 1e-069 |
| Q5WMR0 Os05g0415700 protein | 682 | 1e-069 |
| Q6AT83 Putative beta-N-acetylhexosaminidase | 682 | 1e-069 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G65590.1 HEXO3 (BETA-HEXOSAMINIDASE 3); beta-N-acetylhexosaminidase/ hexosaminidase | 1095 | 8e-120 |
| AT3G55260.1 HEXO1 (BETA-HEXOSAMINIDASE 1); beta-N-acetylhexosaminidase/ hexosaminidase/ hydrolase, hydrolyzing O-glycosyl compounds | 486 | 3e-049 |
| AT1G05590.1 HEXO2 (BETA-HEXOSAMINIDASE 2); beta-N-acetylhexosaminidase/ hexosaminidase/ hydrolase, hydrolyzing O-glycosyl compounds | 234 | 5e-020 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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