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Information for unigene UN15092
| FASTA Sequence |
| Unigene ID: UN15092 | Length: 725 |
SSR | | ACTTGGTTTTATAATGCCTCTTGTTCTCATGGCTTGTTCTATGATGAGTGTGGAACGTTAAGTTTTATCTGAGGATTATCACGTAC
CTCCTTAAGCCTATTCACCACGTTTTGAGCTAAAATCTTCATAAGCTTTTAATACTACAAAACCAGGTGAAAAAAAAATCACAGGA
ACACCTTCATCAAAACCTTCTCTGATCTTCATTTCCAATGGAATATTAGGATAGCTATATATTGGAATCTCCAGACGCAATATCCT
TTTGACAGTGTATGAGCTGGGACTTCCAGGTGCACCTTGCCAATCCATTGTCATTCCAGGTGTTCCATTAAGTCTCTCCTGAGAGA
GAGCTCTGTTCCAAGCAGCTAAACCGGATTAGGAGAAGCCATTGGACTGGGACTTCTGTGTCTGAGTCTATCAAAATCGCCGCCAA
ATCCTCTTGGTTAGGCATCATTCCAGATACCCTGAACATCTCTTGATTCAACAGGCGGCTGCATATGGGCAAGACTTGCATAAAAG
GTGTAAGCTTTTGATGTTCAACGAGAAGCTCCGTCAAGTACTGAGAGCTGTCGATCTCAGGAGTGCTTCTGATCTGAGGAGAAGCA
GCTCTAGCAGGAGAAAAGTAAGACGAGTTGTTGTTGTATAATCCAGACATGACTCATCTTCTTCTTCTTCTTCATCTTTCTCTAGA
AGCGTACACAATACAAGAGCGAGAAAGGAGAGATCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_181395 RNA-binding KH domain-containing protein [Arabidopsis thaliana] | 334 | 3e-029 |
| BAD06470 hypothetical protein [Nicotiana tabacum] | 276 | 1e-022 |
| XP_002531808 conserved hypothetical protein [Ricinus communis] | 266 | 2e-021 |
| XP_002323686 predicted protein [Populus trichocarpa] | 262 | 6e-021 |
| AAG51340 unknown protein; 28504-31237 [Arabidopsis thaliana] | 261 | 7e-021 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9ZVI3 KH domain-containing protein At2g38610 | 334 | 1e-030 |
| Q8GYR4 KH domain-containing protein At3g08620 | 252 | 4e-021 |
| Q8GWR3 KH domain-containing protein At1g09660 | 136 | 1e-007 |
| Q9FKT4 KH domain-containing protein At5g56140 | 128 | 9e-007 |
| Q0WLR1 KH domain-containing protein At4g26475 | 124 | 3e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q76KT6 Putative uncharacterized protein | 276 | 9e-023 |
| B9T0N9 Putative uncharacterized protein | 266 | 1e-021 |
| B9IGX2 Predicted protein | 262 | 4e-021 |
| B9MTT7 Predicted protein | 261 | 5e-021 |
| B9T521 Nucleic acid binding protein, putative (Fragment) | 255 | 3e-020 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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