Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN15101

FASTA Sequence
Unigene ID: UN15101Length: 1493 SSR 
GGTAACAAATTCAAATACTTTATTATATTCTTCCAATTTGTACACAAATTCAACAAGGTCCCACATACTTCCCACTACTACTAGTC
TACTACTCAAATACCCCTTTTAAGCTCCTTCATCAACCTCCCACTAAAGTCATGAAAACCAAAAGGTGCTTTCATCAAAGTCCACC
TAAAATGATAACAAATCATATTTAATCAAGTAAGCTTTTGACAAACTCCCTTCTACTTTAAATCCTACATTGATTCCATCTCCCAC
GCCATACAAGTGGTATGGGAGGGAGATGAAGTATCAAGAAACCAGAGTCATCATGAGTTGTAGTAGTAGAAAGTAAAGCCACGTTG
GACCGTTTGAGTTGCTGTACAAACCCTTACTTGCACAAAAACCCTACTGTGGTGGAGGAGGATTGGTCTCTGGTTTAACCACTGAT
GATGTATCTGGAGGCTGAGAATGGTAAATAGCCATAGCCAGTGAGATTGGCATCATACAAAGAGCCTTAGATTGAAGTAGCTGCAT
AGCTGCTCCAACGTTTTCTTCCATCAACTTAGCCACTTGGCGTTCAGTCCCATCGTTTGACCATTTCTCCCATGCAGGTTGTGGCG
TCCTTCCACCATCACTTGTTTCATCCTCAACTGATGATGACAAAGGCATATCAGTAACAAGTGGAGCAACCGCACCGGCTCCACCA
AGACGACTCATGCTCAAAACCTTAACTTGGAGCCTGAGAAACTTAACATAGTCCACAATCTCATCGATCATAGCAGCTCTATCTGT
CTTGTTAACAGTGGGAACAAGTTCTTGAAGCGCCCTGATCCGTTCAGCTATTCTTTCCCTACGTAGCCTTTCAGCGATGCTATGTG
GATCAGTAGCTTGACCACGCGTAGCTCGAACCCTAGGACGGATCGATGTAGGCTGATGTGGCGCTGCTGGAGCTGGCTGTTGCATC
GGCTGCCCATGAAAAACAGGTCCTTTCATAGAAGAAGAAGAAGAACAACGATTCACACTTCCATGACCACCACCACCACCTTCAGG
TCTAAGAAAGCCATGTCCTTTGCCTTGGTCAAGACTCAAGCCTAGAGGAAACATCTGATTGTGAAACCCAGTTGGTCCACTTCCTC
CTACTCCTAACCCACCACCACCCATGTGACTTTCTTCCTCTCCTGAACCCAGCTGCAGCATCATCGGCGGTGCTCCTCCTCCTCCT
CCTCCGCCTAACCCACCGTCGGATGAAGAAGCTGAGAAGTTGGGAAGACCGAGGATTTGGTCGAAGAAGTCATCAGAAGGTGTTTG
GTCTGAAAGGTTACCATGTGGGTTGTTGTTACTAGCCATTTGGTTTTGGTTTTGAGTTCAAAAAAAAGAACAGATTTTTGGAGTCG
GTGAGTTGTGACTTATGATTAGCGAGTTTGAGTCTTCTATAGAGAAAATCTACATGAGAAAAAAGTTGCAGAAAAAGCTGTTTGGT
GAGTGATGCCTTTAAAATGAAAGAGGAGGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002872829 hypothetical protein ARALYDRAFT_490301 [Arabidopsis lyrata subsp. lyrata]13742e-149
NP_567245 transcription factor UNE12 [Arabidopsis thaliana]13715e-149
BAJ33851 unnamed protein product [Thellungiella halophila]13681e-148
AAM65759 putative bHLH transcription factor [Arabidopsis thaliana]13671e-148
AAM10948 putative bHLH transcription factor [Arabidopsis thaliana]13652e-148

Swiss-Prot top hits (Blast detail)Scoree value
O22768 Transcription factor UNE1213712e-150
Q93Y00 Transcription factor bHLH711732e-127
Q9ZUG9 Transcription factor bHLH664662e-045
Q9LSQ3 Transcription factor bHLH824402e-042
Q8S3D5 Transcription factor bHLH693237e-029

TrEMBL top hits (Blast detail)Scoree value
B9DFF4 AT4G02590 protein13713e-149
B9S4R9 DNA binding protein, putative10183e-108
B9GS74 Predicted protein9663e-102
C0JP11 Putative basic helix-loop-helix protein BHLH39332e-098
A5AI09 Putative uncharacterized protein6966e-071

Arabidopsis top hits (Blast detail)Scoree value
AT4G02590.1 UNE12 (unfertilized embryo sac 12); DNA binding / transcription factor13712e-151
AT4G02590.2 UNE12 (unfertilized embryo sac 12); DNA binding / transcription factor13712e-151
AT1G03040.1 basic helix-loop-helix (bHLH) family protein11722e-128
AT4G02590.3 UNE12 (unfertilized embryo sac 12); DNA binding / transcription factor11212e-122
AT2G24260.1 basic helix-loop-helix (bHLH) family protein4661e-046

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
113  38%
 
123  38%
 
92  25%

Unigene MembersMember information