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Information for unigene UN15130
| FASTA Sequence |
| Unigene ID: UN15130 | Length: 1283 |
SSR | | CTGTTAAAATAAACACGCCTTCTTCTTCTTCTTCGTCTTCACAATTTTGGATCTCAGCCACTCTACTTCGGATTAATTAAGAAGAT
ATTTGTTTCGTGTTGTTGGGAGGAAGAAATTGTGTTTGGATCTGAAACGAAAAATCAATCAAAAAGATGGGGTTCTTCAGCACAGT
ACTAGGGTTTTGCGGATTTGGGATAGGGATATCCATGGGGCTCGTCATCGGATACTTCCTTTTCATCTACCTCCAGCCCAACGACG
TCAAGGATCCAAAAATTGAACCGATAGCAGAGCAAGATCCCAAATCCATGCTCCGTATGTTCCCCGAGATCCCTCTCTGGGTCAAG
AACCCCGACTTCGACCGTGTTGACTGGATCAACAAATTCCTCGAGTACATGTGGCCTTACCTCGACAAGGCCATCTGCAAAACCGC
ACGCAACATAGCCAAGCCAATCATCGAGGAGCAGATCCCCAAGTACAAGATCGACTCCGTCGATTTCGATACCCTCACTCTCGGCT
CCCTCCCTCCCACTCTCCAAGGCATGAAAGTTTACCTCACCGACGAGAAGGAGCTGATCATGGAGCCTTGCTTGAAATGGGCAGCT
AATCCTAATGTCCTTGTCGCTATCAAGGCTTTCGGACTCAAGGTTACTGTTCAGGTCGTTGATCTTCAGGTTTTTGCGCAGCCTCG
TATCACTCTCAAACCCTTGGTCCCGAGCTTCCCTTGTTTCGCCAGTATTTATTTCTCTCTTATGGACAAGCCACACGTTGATTTTG
GCTCAAGCTTGGTGGAGCTGATCTTATGTCTATCCCTGGCCTCTACAGATTTGTCCAGGAGCAAATCAAGGATCAAGTTGCAAACA
TGTATCTCTGGCCTAAGACCCTTGTGGTTCCAATCCTTGACCCTGCCAAAGCGTTTAGAAGGCCGGTTGGAATCGTCCATGTGAAG
GTCGTGAGGGCTGTTGGGCTCAGGAAGAAAGATATGTTGGGTGGGGCTGACCCCTACGTCAAGATCAAGCTCTCTGAAGACAAGAT
TCCCTCTAAGAAGACCACTGTCAAACACAAGAATCTGAACCCTGAATGGAACGAGGAACATAAATTCTCTGTCAGAGATCCCCAGA
CTCAGTTCTAGAGTTCAGTGTGTATGACTGGGAACAGGTGGGAAGCACGACAAGATGGGTATGATGTGTACCGCTGAAAGAAATGG
TGCCTAACGACACAAAGCTCACTTTGGATTGCGTAAGACTCTGGAGGTGCTGAAGAAGAGCGCAGCCTGACAAGGATAG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_001189566 synaptotagmin A [Arabidopsis thaliana] | 1026 | 4e-109 |
| NP_565495 synaptotagmin A [Arabidopsis thaliana] | 1025 | 5e-109 |
| NP_001189565 synaptotagmin A [Arabidopsis thaliana] | 1025 | 5e-109 |
| XP_002878529 plant synaptotagmin [Arabidopsis lyrata subsp. lyrata] | 1012 | 2e-107 |
| XP_002530822 calcium lipid binding protein, putative [Ricinus communis] | 950 | 2e-100 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q5M7N9 Extended synaptotagmin-3 | 187 | 3e-013 |
| Q5FWL4 Extended synaptotagmin-2-A | 185 | 5e-013 |
| Q7ZWU7 Extended synaptotagmin-2-B | 183 | 9e-013 |
| Q9R0N7 Synaptotagmin-7 | 129 | 2e-006 |
| O43581 Synaptotagmin-7 | 128 | 2e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SKR2 Expressed protein | 1025 | 3e-109 |
| B9SXV3 Calcium lipid binding protein, putative | 950 | 2e-100 |
| B9H193 Plant synaptotagmin | 935 | 9e-099 |
| B9HR67 Plant synaptotagmin | 927 | 8e-098 |
| A5CAU2 Putative uncharacterized protein | 909 | 1e-095 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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