Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN15141

FASTA Sequence
Unigene ID: UN15141Length: 906  SNP
TGATACGAATGTTCCCTATATGGGCTTCAGGGATCATCTTCTCAGCTGTATACGCACAAATGTCCACGATGTTTGTTCAGCAAGGC
AGAGCCATGGACTGCAAAATCGGATCCTTCCAGCTTCCTCCAGCAGCGCTTGGAACGTTTGATACAGCTAGCGTCATCATCTGGGT
TCCACTCTACGACAGGTTCATCGTCCCTTTGGCTAGACGGTTCACTGGAGTAGACAAAGGGTTCACTGAGATACAGAGAATGGGGG
TAGGTTTGTTCGTGTCTGTTCTTTGCATGGCAGCTGCAGCCATCGTTGAAATCATCAGGCTCCATATGGCCAACGAGCTTGGACTG
GTGGAGTCAGGTGCGCCGGTTCCTATATCTGTGTTATGGCAGATCCCACAGTACTTCATCCTCGGTGCTGCGGAAGTGTTCTATTT
CATAGGGCAGCTGGAGTTTTTCTATGACCAGTCTCCAGATGCAATGCGAAGCTTGTGCAGTGCTTTGGCTCTTTTGACCAATGCTC
TTGGGAACTACTTGAGCTCGTTGATCCTCACGCTGGTGACTTATTTCACGACGAGGAACGGTGAACAAGGTTGGATCTCGGATAAT
CTGAACTCTGGTCATCTTGATTACTACTTCTGGCTTTTGGCTGGGCTTAGCCTCGTGAACATGGCGGTTTACTTTTTTTCTGCCGC
TAGGTATAAGCAGAAGAAGGCGCCCTAGTAATGATGGTGTTTTTGTTTTTATCTCTCCTTTCATTACATTCAAGGTTTGGTTCTTT
TCTTGTGTAAATTGTGTCTGTTTAAAAGAACAACTGTTGTGTACTTGTTTCTTTCAATTCCAAACAGTTTCACATTTGCTTTAGCA
GTGTAAATCAATTACTATCTTCTAAACAATAAGTCAATAACTCTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
CAA54634 oligopeptide transporter 1-1 [Arabidopsis thaliana]11921e-128
NP_178313 peptide transporter PTR2 [Arabidopsis thaliana]11921e-128
XP_002875108 ATPTR2-B [Arabidopsis lyrata subsp. lyrata]11858e-128
ADQ43190 peptide transporter [Eutrema parvulum]11785e-127
ACQ90598 putative nitrate transporter [Eutrema halophilum]11652e-125

Swiss-Prot top hits (Blast detail)Scoree value
P46032 Peptide transporter PTR211926e-130
Q9M390 Peptide transporter PTR17258e-076
Q9LFB8 Peptide transporter PTR57123e-074
Q9FNL7 Peptide transporter PTR3-A4677e-046
Q9M817 Probable peptide transporter At1g521904336e-042

TrEMBL top hits (Blast detail)Scoree value
C7SI16 Putative nitrate transporter11651e-125
D6PP47 AT2G02040-like protein (Fragment)9884e-105
D6PP43 AT2G02040-like protein (Fragment)9875e-105
D6PP46 AT2G02040-like protein (Fragment)9831e-104
D6PP48 AT2G02040-like protein (Fragment)9822e-104

Arabidopsis top hits (Blast detail)Scoree value
AT2G02040.1 PTR2 (PEPTIDE TRANSPORTER 2); dipeptide transporter/ high affinity oligopeptide transporter/ nitrate transmembrane transporter/ peptide transporter/ transporter/ tripeptide transporter11925e-131
AT2G02020.1 proton-dependent oligopeptide transport (POT) family protein7875e-084
AT3G54140.1 PTR1 (PEPTIDE TRANSPORTER 1); dipeptide transporter/ transporter/ tripeptide transporter7257e-077
AT5G01180.1 PTR5 (PEPTIDE TRANSPORTER 5); dipeptide transporter/ transporter7122e-075
AT1G32450.1 NRT1.5 (NITRATE TRANSPORTER 1.5); nitrate transmembrane transporter/ transporter5375e-055

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
103  30%
 
112  20%
 
63  30%
 
81  10%
 
91  10%

Unigene MembersMember information