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Information for unigene UN15163
| FASTA Sequence |
| Unigene ID: UN15163 | Length: 1354 |
SSR | | ACATCAACTATTACATAAATCAAAAGACAAATACTTGGACCAAGTCGACCATTACAAACCACGATACAAGACACTACTACTAGCTC
CCTCTCAGACAAACATGTCTAGACCCCAGGAAATTTGGAACCCAAACCCAACCCCTTTTATTTCAACGTTATTTTATTGCTTGGCA
TACAAGCCAAGTGAGACTCATAGGTTACAAACCAAGAAGCATACATATAGAATCAACGACTTCGAATGAGAGACACACATACATAA
GAGACTCTGAACAAGGTCTAGAAAAAGAAAACAAGAAAGTGATAAAATTAAGGGAAAAAAAAGGAGAAAAGTTATCTTAGCGCCAA
GACACCAAGATTTTATTACTGATAGTACATGAGCTGCTGATGCGCCGCAGCTACATTCTGAAAACCACCATCGTACATAGCCGCTG
CACTTGCTCCAGCTGCATTGACATGCCTTAGAGAATGCTGAGCCTGAGGGTGCATCTTGGCTAAAGCCAGTTGCCTCTCATAGGCT
AAAAGGTCCATTGGGGACAGACCAGGGACTGCCACTGGCACTGGTGGTGGAAGCGGGTTTGAGGCTGTCCCTATAGGAGTTGGTTT
GTTTCCCCATGAACACTTTATCTGTCTGTTAAAGAGGAAAGGCTGAGAGTTGCCCATTTGAATAGCAAGAGCAGCCTCATCATGAG
TGTTGTATCTCACAAAACCAAAGCCTTTGTCTCGCTGGACACGGACCTCTTCAATCACTCCAGCGCCAAGTGTATGGAACAGGCGG
TGTAGATCAAGCTGAGTTACTTCAGGAGCGAGGTTTCCTACATACACAGTGGTATACTGAGGATTGTTTTCAGGAGCTTCTTCGTT
TGAGATTGAGATCTCTCTTGAAGAAGAACCTCAGTGACCTGCGTATGGATGTTGCCAGCATACACACTGCGGCAAGTAGTGGGATC
AAAACCAGGAGGAAGGTTTCCACTTGGTAGAGGCTCCATCTGAGGAGGAGGAGGAGGTGGAGGAGCCATGAGGCTAGGATGATAGA
GAGAGTGGTGTTGTTGCATCAAAGCTTGCTGCATCATTGCTTGTTGCTGCTGCTGCTGCTGTTTGAGCCTCGGATTCTGCATCTTT
TTTTTTCTCACTGCGAGATGAGATAGAAAATATCTGTTTTGTTTCCCGAGAAAAGACCTCTTTCCTCTTTTTAGCTTAGGGTTCGA
AATCAACTAAAAACGAAGAAGCAAAAAAAAGAAAAAAAAAAGAAAGGAAAAAAAAAAAAGAGAAATAAGAGAGGAGAGAGAAAACA
GAAATTGAACGCTATTGTGAATGGATGGAGTAAAGAAAGGGTTGTACGAGACTGGTGACCATCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_175810 oligouridylate-binding protein 1A [Arabidopsis thaliana] | 781 | 1e-080 |
| NP_849806 oligouridylate-binding protein 1A [Arabidopsis thaliana] | 781 | 1e-080 |
| XP_002894477 hypothetical protein ARALYDRAFT_474538 [Arabidopsis lyrata subsp. lyrata] | 774 | 7e-080 |
| XP_002882868 hypothetical protein ARALYDRAFT_478823 [Arabidopsis lyrata subsp. lyrata] | 721 | 1e-073 |
| AAM65229 oligouridylate binding protein, putative [Arabidopsis thaliana] | 712 | 1e-072 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q3ECQ4 Putative uncharacterized protein At1g54080.2 | 781 | 7e-081 |
| Q9SYG4 At1g54080/F15I1_16 | 781 | 7e-081 |
| Q8LAP3 Oligouridylate binding protein, putative | 712 | 7e-073 |
| Q9LJH8 AT3g14100/MAG2_5 | 704 | 6e-072 |
| B9ST80 Nucleolysin tia-1, putative | 653 | 5e-066 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G54080.2 oligouridylate-binding protein, putative | 782 | 3e-083 |
| AT1G54080.1 oligouridylate-binding protein, putative | 782 | 3e-083 |
| AT3G14100.1 oligouridylate-binding protein, putative | 705 | 3e-074 |
| AT1G17370.1 UBP1B (oligouridylate binding protein 1B); mRNA 3'-UTR binding | 553 | 1e-056 |
| AT1G17370.2 UBP1B (oligouridylate binding protein 1B); mRNA 3'-UTR binding | 553 | 1e-056 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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