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Information for unigene UN15179
| FASTA Sequence |
| Unigene ID: UN15179 | Length: 932 |
| SNP | GGATCTCCTTCCTTCAAAGTAGACAACTTTGGATCCCTCCCTACGTCCTTACGCCGAGCGAGATCTACACAATCTCCGATCCCCAA
AATGGCGACGAGAAGACGTACTTTGCTCAAGGTCATTGTCCTCGGCGATAGCGGGGTTGGTAAGACTTCCTTGATGAATCAATATG
TGCATAACAAGTTTAGTCAACAGTATAAAGCGACTATTGGTGCTGATTTCGTGACCAAGGAGCTTCAGATTGGGGATAAGCTTGTT
ACTCTCCAGATTTGGGATACTGCTGGACAAGAGAGGTTCCAGAGTCTTGGTGCTGCGTTTTACAGAGGTGCAGATTGTTGCGCTTT
GGTTTATGATGTCAACGTCGCCAAGTCCTTTGATTCTCTCGAAACGTGGCATGAGGAGTTTCTTAAACAGGCAAGTCCAGCGGATC
CAAAGACATTTCCGTTTATAGTGCTTGGAAACAAGGTTGACATAGGTGGAGGGAGCACTAGAGTGGTCTCTGAGACGAAAGCAGCT
GACTGGTGTGCTTCAAATGGTAACATACCCTATTTCGAGACATCAGCTAAAGAAGACTACAATGTCGATGAGGCTTTCTTTACCAT
TGCCAAAACCGCTCTTGCCAACGAGAATGATCAGGACATATACTTCCAAGGCATACCAGTTGCAGTGACTGAAAACGAGCCAAAAG
GGGGTGGTTGCGCTTGCTGAACTGTGGATTTGAACATTCTTTTGCGTTCGTTTTTGATACATTTGCTCGTTATTCATTGAAGGTTG
GTGTACTCTTTGAGGATTTCAGAACGATAAGTTTGTAGAATCAATCTTTTCAGCTATTCCATCATGTATTAATTTGATTGGAGGAG
TCTGTATGATCAAAATCGATTCTGCTGGATACATTTTGTTATTTTCGGAAGAACAGTTATTTGCTCTTATTA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002872458 AtRABG3a [Arabidopsis lyrata subsp. lyrata] | 1005 | 6e-107 |
| NP_192710 RAB GTPase homolog G3A [Arabidopsis thaliana] | 1002 | 1e-106 |
| CAB39639 rab7-like protein [Arabidopsis thaliana] | 985 | 1e-104 |
| XP_002264356 PREDICTED: hypothetical protein [Vitis vinifera] | 911 | 5e-096 |
| CAA98168 RAB7A [Lotus japonicus] | 908 | 1e-095 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q43463 Ras-related protein Rab7 | 893 | 3e-095 |
| Q41640 Ras-related protein Rab7 | 883 | 4e-094 |
| O04157 Ras-related protein Rab7 | 814 | 4e-086 |
| O24461 Ras-related protein Rab7 | 768 | 9e-081 |
| Q9XER8 Ras-related protein Rab7 | 765 | 2e-080 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G09720.1 Ras-related GTP-binding protein, putative | 1003 | 4e-109 |
| AT4G09720.2 Ras-related GTP-binding protein, putative | 840 | 3e-090 |
| AT1G22740.1 RABG3B; GTP binding | 818 | 1e-087 |
| AT1G52280.1 AtRABG3d (Arabidopsis Rab GTPase homolog G3d); GTP binding | 747 | 2e-079 |
| AT3G16100.1 ATRABG3C (ARABIDOPSIS RAB GTPASE HOMOLOG G3C); GTP binding | 744 | 5e-079 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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