Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN15180

FASTA Sequence
Unigene ID: UN15180Length: 872 SSR 
AATTGAAACGCAGTTTTTTTTTGTCAACTATATTGAAACATAGTTATACACAAACCCATCAATCAATGGTGGTCTTATTATTACGT
GGGGTTTTAATGTAATAAACATGACAATGGGTTTTAGGGTCTTCAGTTATATTAATCCAAAGCTTATGTGAGCTTATTATTCTTCA
TCTGCTTCTTTTCTCTCCATTCCTTTATGCTACTTTCTACCTTGGCATTGACACGAGCTTGAAAACCTGGATATGGCTCGTACCCG
AAAACCATTTGAAGAATCTCAAGCAACACAAAGAAAGGAGCCATGAGAAAAGCTTGGGCTAGATTGTCTAAAAGCGCAGGTGCTCG
TTTCTCGAACAATCCATGGCCAAGAAACTGCCCGGTCCAACATAACAGCTGAGATGCTAACCCAACCTTTACGGCAAGAGAAGGTC
CTAACCGAACAGCGAGGACACTGGACCCAACCCAGCAAGCGAAGCACATGAGAGCCGCGACGAACCCTGATTTCTTATCCAAACAG
ATGTAGAACAGAGCATAAGCCACCGTGACGGCGAACCCGACGTCTAACCTCAGAACGCCGTCGAGTGTGATCGTCTGAGGAAACCC
TAATTGAGAAAGGTCGTAAATTGGGGACGCTGGGTAGAGGAGAAGCAAGGCTGTGAAGACGATGGGCCATACGAAGATGATGTGGA
TCGCGATGTTGATTGGGTTGCTGTGGTATGCGCCGTAGAAGGCGAAGTGCTTCTCCAGATCGAGCAATCCCATCTTGTAGAGAGAG
AGAGAGAGAGAGAGAGGATGATAATGTGGTCAGGGAAGGGTTGGTGGGGGGGGGGTTGAAATAGTATCGTCACCTTCGCTTAAACA
AGAAGATTACCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002893011 hypothetical protein ARALYDRAFT_889295 [Arabidopsis lyrata subsp. lyrata]8721e-091
NP_564061 uncharacterized protein [Arabidopsis thaliana]8641e-090
NP_177584 uncharacterized protein [Arabidopsis thaliana]8372e-087
CAN69808 hypothetical protein VITISV_019656 [Vitis vinifera]6695e-068
XP_002311311 predicted protein [Populus trichocarpa]6695e-068

Swiss-Prot top hits (Blast detail)Scoree value
O13737 Uncharacterized endoplasmic reticulum membrane protein C16E8.021952e-014
P25338 Uncharacterized endoplasmic reticulum membrane protein YGL010W1602e-010

TrEMBL top hits (Blast detail)Scoree value
Q9M9U3 At1g18720/F6A14_178649e-091
Q9CA70 Putative uncharacterized protein F1M20.128371e-087
A5B816 Putative uncharacterized protein6694e-068
B9HI88 Predicted protein6694e-068
A9PDL0 Putative uncharacterized protein6685e-068

Arabidopsis top hits (Blast detail)Scoree value
AT1G18720.1 unknown protein8654e-093
AT1G74440.1 unknown protein8377e-090

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
191  20%
 
122  40%
 
91  20%
 
71  20%

Unigene MembersMember information