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Information for unigene UN15198

FASTA Sequence
Unigene ID: UN15198Length: 1053 SSR 
GGAATAACAATCTCACATCATCATCCATCAGAACACAACAGGGAAGAGAGAGAGAGAATGAAGGGGGGCACGAAAAGTCCGATCCA
GGCGGTGTGGTCATGGGTGAGGAGGCAACCACCGAAGGTGAAGGCTTTTCTGGCGGTGGTCTCAGGCATGGCTGCTTTGGTTCTAC
TGAGATTCATTGTCCACGATCACGACAATCTCTTCGTGGCCGCCGAAGCTGTTCACTCCATCGGGATCTGTGTGCTCATCTACAAA
CTTATGAAAGAAAAGACCTGCGCCGGATTGTCACTGAAATCCCAGGAGCTCACGGCCATATTTCTAGCAGTTAGGCTGTATTGCAG
CTTTGTGATGGAGTATGATATACACACCATCCTGGATCTGGCTACTCTTGGAACAACTCTCTGGGTTATATTTATGATCCGTTTTA
AGCTAAGGCCTAGTTACATGCAGGACAAAGACAACTTTGCTCTCTATTATGTGCTTGTGCCCTGTGTTGTCTTAGCCGTGTTGATC
CATCCATCGACCTCTCACAACATATTGAACAGGATGTCTTGGGCATTGTGTGTGTACCTCGAAGCTGTTTCAGTACTGCCTCAGCT
GCGCGTGATGCAGAACACCAAGATTGTTGAACCGTTCACAGCGCATTATGTATTTGCACTAGGAGTAGCAAGGTTCCTTAGCTGTG
CACACTGGGTTTTACAGTTGTGGACACGAGGGGAAGATTGCTGGTAGCATTGGGATATGGATGTGGCCATCGATGGTCTCATCTCA
GAGATTGTTCAAACTTTCATTCTTGCTGATTTCTGTACTACTACGTCAAAAGTGTATTCGGAGGGCAGCTTGTTCTCCGTCTTCCG
TCTGGAGTAGTTTAAAGTTACAAAGATAGAAAATACTCCAATGGTGTAGCTTGCCCAAGTCAGGAAAGGCAGGCAGCTTCTTTACC
TCTTCCCTTATACAGTTTTATGTATCAGAAGGTGACTCTTGTTACGAATTAATTTTACTGTGTTGTATATTTATGATTATTGAAGG
TGGTTTTCACTTCTTTGTGAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002866815 ER lumen protein retaining receptor family protein [Arabidopsis lyrata subsp. lyrata]10981e-117
NP_568047 ER lumen protein retaining receptor family protein [Arabidopsis thaliana]10953e-117
XP_002878537 ER lumen protein retaining receptor family protein [Arabidopsis lyrata subsp. lyrata]10631e-113
XP_002529256 ER lumen protein retaining receptor, putative [Ricinus communis]10381e-110
NP_565501 putative ER lumen protein retaining receptor [Arabidopsis thaliana]10343e-110

Swiss-Prot top hits (Blast detail)Scoree value
Q09473 Putative ER lumen protein retaining receptor C28H8.42876e-025
O76767 ER lumen protein retaining receptor2714e-023
Q9ZTN2 ER lumen protein retaining receptor2714e-023
Q611C8 ER lumen protein retaining receptor2671e-022
P48583 ER lumen protein retaining receptor2625e-022

TrEMBL top hits (Blast detail)Scoree value
Q8LD89 Putative ER lumen protein retaining receptor10952e-117
B9STD7 ER lumen protein retaining receptor, putative10388e-111
Q9SKP4 Putative ER lumen protein retaining receptor10342e-110
Q9C5H8 Putative ER lumen protein retaining receptor10315e-110
B9H144 Predicted protein10299e-110

Arabidopsis top hits (Blast detail)Scoree value
AT4G38790.1 ER lumen protein retaining receptor family protein10951e-119
AT2G21190.1 ER lumen protein retaining receptor family protein10341e-112
AT1G75760.1 ER lumen protein retaining receptor family protein9865e-107
AT1G19970.1 ER lumen protein retaining receptor family protein9732e-105
AT3G25160.1 ER lumen protein retaining receptor family protein7527e-080

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  67%
 
121  33%

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