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Information for unigene UN15212
| FASTA Sequence |
| Unigene ID: UN15212 | Length: 1291 |
SSR | | GGACTCACTTGACTATTCTCACATTCAGAACTTTGCTATCTCTCTCTCTCGACCACATCGCCATGGCTGACAAGAAGATTAAGATC
GGAATTAACGGTTTCGTAAGAATCGGTCGTTTGGTGGCGAGAGTGATCCTTCAGAGGAACGATGTTGAGCTCGTCGCTGTTAACGA
TCCTTTCATCACCGCCGAGTACATGACATACATGTTTAAGTACGACAGTGTTCACGGACAGTGGAAGCACAATGAACTTAAGATAA
AGGATGAGAAAACCCTTCTCTTTGGTGAGAAGCCAGTCACAGTTTTCGGCATCAGGAACCCTGAGGATATTCCATGGGGTGAGGCC
GGAGCTGACTTTGTTGTCGAGTCTACTGGTGTCTTCACTGACAAGGACAAGGCCGCTGCTCACTTGAAGGGTGGTGCCAAGAAAGT
TGTCATCTCTGCCCCAAGCAAAGATGCTCCCATGTTTGTTGTTGGTGTCAATGAGCATGAGTACAAGTCTGATCTCAACATTGTTT
CCAACGCTAGTTGCACTACTAACTGCCTTGCTCCACTTGCCAAGGTTATCAATGACAGGTTTGGAATCGTTGAGGGACTCATGACT
ACCGTCCACTCGATCACTGCTACCCAGAAGACTGTTGATGGTCCATCAATGAAGACTGGAGAGGTGGAAGGGCTGCTTCCTTCAAC
ATCATTCCAAGCAGCACCGGAGCTGCCAAGCTGTCGGAAAGGTGCTTCCACAGCTCAACGGAAAGTTGACCGGAATGTCCTTCCGT
GTTCCCACCGTTGATGTTTCAGTTGTTGACCTCACGGTCAGACTCGAGAAAGCTGCAACCTACGACGAGATCAAGAAGGCTATCAA
GGAGGAATCTGAAGGCAAGCTAAAGGGAATCCTTGGTTACACCGAGGATGATGTTGTCTCAACTGACTTCGTTGGTGACAACAGGT
CTAGCATTTTTGATGCAAAGGCTGGAATTGCATTGAGTGACAACTTCGTGAAGCTGGTGTCGTGGTATGACAACGAATGGGGTTAC
AGCACCCGTGTGGTCGACTTGATCCTTCACATGTCCAAAGCCTAGAGCGCCGCCCAAGAGAGACAAGATCTCAAACGATGTAATGG
TGTCTTTCAGTTTTTTCGAATAAATTTTCTCAGAGATCTAAAAACTCATCTTTTCTTTTTTGGTTTTAGCGATTCTCCTTCACGTG
ACGTGATAGGAAGTTTGTAAACCTTGTTTATTTCTACACTGGAAACCCTTTGATACAAGTTTACTTTTATTGCAATCCATTCAAGA
T
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| P04796 RecName: Full=Glyceraldehyde-3-phosphate dehydrogenase, cytosolic | 1012 | 2e-107 |
| XP_002882331 glyceraldehyde-3-phosphate dehydrogenase C subunit [Arabidopsis lyrata subsp. lyrata] | 993 | 3e-105 |
| ACS68203 glyceraldehyde-3-phosphate dehydrogenase 2 [Brassica napus] | 993 | 3e-105 |
| NP_187062 glyceraldehyde-3-phosphate dehydrogenase, cytosolic [Arabidopsis thaliana] | 990 | 6e-105 |
| NP_172801 glyceraldehyde 3-phosphate dehydrogenase [Arabidopsis thaliana] | 990 | 6e-105 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P04796 Glyceraldehyde-3-phosphate dehydrogenase, cytosolic | 1012 | 7e-109 |
| P25858 Glyceraldehyde-3-phosphate dehydrogenase, cytosolic | 990 | 2e-106 |
| P26518 Glyceraldehyde-3-phosphate dehydrogenase, cytosolic | 943 | 7e-101 |
| P26520 Glyceraldehyde-3-phosphate dehydrogenase, cytosolic | 933 | 1e-099 |
| P34783 Glyceraldehyde-3-phosphate dehydrogenase | 928 | 4e-099 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C0Z2I0 AT1G13440 protein (Fragment) | 990 | 4e-105 |
| Q0WVE7 Glyceraldehyde-3-phosphate dehydrogenase C subunit | 990 | 4e-105 |
| Q9FX54 At1g13440/F13B4_8 | 990 | 4e-105 |
| B9DGZ4 AT1G13440 protein | 987 | 9e-105 |
| Q8LAS0 Glyceraldehyde-3-phosphate dehydrogenase C subunit (GapC) | 985 | 1e-104 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G13440.1 GAPC2 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C2); NAD or NADH binding / binding / catalytic/ glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)/ glyceraldehyde-3-phosphate dehydrogenase | 990 | 2e-107 |
| AT3G04120.1 GAPC1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C SUBUNIT 1); glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)/ glyceraldehyde-3-phosphate dehydrogenase | 990 | 2e-107 |
| AT1G13440.2 GAPC2 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C2); NAD or NADH binding / binding / catalytic/ glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)/ glyceraldehyde-3-phosphate dehydrogenase | 720 | 4e-076 |
| AT1G79530.1 GAPCP-1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE OF PLASTID 1); NAD or NADH binding / binding / catalytic/ glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)/ glyceraldehyde-3-phosphate dehydrogenase | 694 | 5e-073 |
| AT1G16300.1 GAPCP-2; NAD or NADH binding / binding / catalytic/ glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)/ glyceraldehyde-3-phosphate dehydrogenase | 675 | 7e-071 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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