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Information for unigene UN15213
| FASTA Sequence |
| Unigene ID: UN15213 | Length: 667 |
SSR | | GACGTAACACAATAACCTCAAAGAGTTAATAACATGTAAATTTAGCATAGCTGCGTGCGAGTTATAAAGTCTGCAGACATTTATTC
ACACACCCAAGGCATGTAGGCACCAAACCAACACAAAGGGAAAGATGACTCAAGTGAAAGTGACAATAAACGCAACAACGGATTTT
TATTAAAAACACCAAACATACTACTAGGTAAATAGTTATGAAGAGAACGATAAACCAAATCAAGCCGAAGCAACTTGAGAGTGCTT
CTCAAGCTTGGCTACGATTTCATCTTTCGCAGCACCGACCACCTTGTCGACCTTCTCTTCACCCTTCATGTAGACAAATGTCGGCA
TGGCCTCAACTTCGAAATCCTTAGCAACAGAATTCAATTCATCGACATCGACCTTGAAGAAGACGACATCAAGGTGCTTCTTAGCC
AACTCGACGAAGATGGGTGCAATGAAACGGCAAGGTGGGCACCATGTTGCTGTGAAGTCTATCACAATCAGTTTGTTGGAGTCTTT
GGCGGCCTTGAACTTGTTGTTCCAGTCATCGACGGTGTGGCAAGCGATCACTTCTCCTGCTGGGATCAATTCTGCTGGTGCGGCCA
TTTTTCTCTGTTCTTTCTTTCTCTCTCTCTCTCTGTTTGATTTTGGATTTGTTTTTGATGAATCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| O64432 RecName: Full=Thioredoxin H-type; Short=Trx-H | 565 | 4e-056 |
| P68176 RecName: Full=Thioredoxin H-type; Short=Trx-H; AltName: Full=Pollen coat protein | 558 | 2e-055 |
| AAG35777 thioredoxin-h-like protein 1 [Brassica oleracea var. alboglabra] | 536 | 8e-053 |
| NP_199112 thioredoxin H3 [Arabidopsis thaliana] | 455 | 2e-043 |
| XP_002865467 thioredoxin H-type 3 [Arabidopsis lyrata subsp. lyrata] | 452 | 4e-043 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O64432 Thioredoxin H-type | 565 | 2e-057 |
| P68177 Thioredoxin H-type 1 | 558 | 1e-056 |
| P68176 Thioredoxin H-type | 558 | 1e-056 |
| Q42403 Thioredoxin H3 | 455 | 1e-044 |
| Q39241 Thioredoxin H5 | 409 | 2e-039 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FQ63 Thioredoxin-h-like protein 1 (Fragment) | 536 | 6e-053 |
| B9GRI3 Thioredoxin h | 375 | 3e-034 |
| A9PB87 Putative uncharacterized protein | 373 | 4e-034 |
| A8HTK0 Thioredoxin h1 | 366 | 3e-033 |
| B6EAX5 TRX | 359 | 2e-032 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G42980.1 ATTRX3 (THIOREDOXIN 3); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor | 455 | 9e-046 |
| AT1G45145.1 ATTRX5; oxidoreductase, acting on sulfur group of donors, disulfide as acceptor | 410 | 2e-040 |
| AT1G19730.1 ATTRX4; oxidoreductase, acting on sulfur group of donors, disulfide as acceptor | 378 | 8e-037 |
| AT3G51030.1 ATTRX1; oxidoreductase, acting on sulfur group of donors, disulfide as acceptor | 346 | 4e-033 |
| AT3G17880.1 ATTDX (TETRATICOPEPTIDE DOMAIN-CONTAINING THIOREDOXIN); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor / protein binding | 297 | 2e-027 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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