Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN15239

FASTA Sequence
Unigene ID: UN15239Length: 1124 SSR 
GGACAATATCACATTGTCTTTCTCTTCTCCCTATCACACTACACAACACATCATGGCTTTCTCCACTAGAACCAGCTCCCTCTTCT
TCTTCTTCACAACACTTGTTCTTCTTTCCACTCAAATCAATGCAAGAGATAGCAACTTCTTTGGAAAATTCCACCGAGAATCCTCC
AAAGACCAAAGCCCTAACAATGTCCTCCCTCTCAAGACCAGCCAAAAAACCACAGTAGAAGAGTCCTTCCCAAACAAGAAAGACCA
AGAACAAGACCCTACCTTTGTCCCCGAGTCCGAAAACGGCTATGGCTTATATGGTCACGAGACCACCTACAACAACAACAAAGAAG
AGTTCAACAACAACAACAACAAGTACGATGAAAAGTTCAACGGTGAGACTTTCTCAACTCCAAGACTGAGCGAGGCTGAAGAGTCT
TACAACAACTACGACGAGAAGTACCCCAAGAAGACGGAGAGCTACGACAACAAGGAAGAGTTCAACCAAAAGTACGATGAAAACGT
CAAGGAAGAGTCTTTCTCTGAGAACAATGAAGACAAGAGAAGCTTCTACAACTCAAACGCTTACGGAACCGAGTTAGAACGTGAAA
CGCCGTACAAAGGTTACAGCCACGATATGGAGAGACAAGGCATGAGTGACACAAGATTCATGGAGAAAGGTAACTACTATTGCGAC
CTTTACAACGATAGAAACCACGGCCATTTCTACCGGAAGCCTCATCAGAAAAGCCCTGCCGGTTATTATTCTTCTCAGGCGACCGA
GAATAACTACGACCAGTCGTACAACAACTACAACAACGAGGAGGAGAAGAGCTTCAAGGATCCTTACGACTCTAAGTGGGAGAAGA
ACATGATGAACGAACAGCCTGAGGAGTTCGATGAGGAGCAAGGAGACCAATTAAAGCCTTGATGAATACTACACTCTTGAAAGTAT
TTTTCTTTTATTTCAACTAAGTTATGTTACGTATGGTTGATTAATCAAACTAAATCAGTGTTATCACTACAACAAATTAAAAGTGA
AAAAAGAGAAATGGGTTTTTGTGTGTTTTCAGTTGAAATGTGTTTGCTTTTGCATATAATATTCGGAGTAAATAAAGATTATATAT
ACTATT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_174162 uncharacterized protein [Arabidopsis thaliana]7163e-073
XP_002893529 hypothetical protein ARALYDRAFT_473059 [Arabidopsis lyrata subsp. lyrata]6563e-066
XP_002881311 hypothetical protein ARALYDRAFT_482341 [Arabidopsis lyrata subsp. lyrata]6025e-060
AAA70397 unnamed protein product [Brassica napus]5891e-058
AAC06020 unknown [Brassica napus]5721e-056

Swiss-Prot top hits (Blast detail)Scoree value
Q6S6W0 Glycoprotein gp21595e-010
Q05049 Integumentary mucin C.1 (Fragment)1489e-009
P13728 Salivary glue protein Sgs-31489e-009
P47179 Cell wall protein DAN41461e-008
P28968 Glycoprotein gp21433e-008

TrEMBL top hits (Blast detail)Scoree value
Q9SGN8 F3M18.167162e-073
Q39360 Brassica napus (clone PIS63-1)5891e-058
Q39361 Putative uncharacterized protein5721e-056
P93019 Expressed protein4016e-037
Q8LGJ1 Putative uncharacterized protein4016e-037

Arabidopsis top hits (Blast detail)Scoree value
AT1G28400.1 unknown protein7178e-076
AT2G33850.1 unknown protein4014e-039
AT1G03820.1 unknown protein1371e-008

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  20%
 
104  80%

Unigene MembersMember information