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Information for unigene UN15240
| FASTA Sequence |
| Unigene ID: UN15240 | Length: 851 |
| SNP | GGAATTCCAAATCTACGAAAAAAATGGCTCTCCGATCTGTCAAAACGCCGTTTGTAACTCCCACCGCCGTCGTCTCCTCCTCAATT
GTCAACAAACCACAGTCTTTCAGATTCGCCTCTAAACCGAGGGCATCACTCGCCGTCTACAACAACCACCACCAACCGATCTCCAT
CACTCGATCGAATCTTATACCCAAACTCAAACCATCATCTCCCGCCGCGAAATTCAGGTGCTCGGCGTCGTCGTCGGCGCTCACGC
CTCAGCTCAGAGATACGCTGGAGAAGCTGGTGAACTCGGAGAAAGTCGTGTTATTCATGAAAGGCACGAGGGATTTCCCCATGTGC
GGATTCTCGAACACGGTGGTGCAGATCCTCAAGAATCTGAACGTCCCCTTCGAAGACGTGAACATTCTCGAGAACGAGATGCTGAG
GCAAGGGCTGAAAGAGTACTCTAATTGGCCCACGTTTCCTCAGCTTTACATCGACGGCGAGTTCTTCGGGGGATGTGACATCACTC
TCGAGGCGTTTCAGAGTGGGGAGTTGCAGGAAGTTGTTGAAAGAGCTATTTGTTCTTGATGCTTTGATATGCTTGTCTTTGGGGTT
TTGTAACAATGCTATTTGATCGTATTGTGTGATGGATATAGTTATAGAAATAGTACTACTATGTGCTTGAATCCATACATTATAAA
ACTCTTCTTGATGTCTCAGAGTTTATGGTTGGTGGTAACACTACAAGAGACATATTGTATAATGGAACTAGCTATGTAACAATAGT
ACCACTATGCACCTGAAACTCTATCCATTACTAAAGTCTTCTTGATGTCTAAGAGTTTATGGTTGGTTAAGTAACGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAO19647 CAXIP1 protein [Arabidopsis thaliana] | 660 | 5e-067 |
| NP_191050 monothiol glutaredoxin-S14 [Arabidopsis thaliana] | 652 | 5e-066 |
| XP_002878005 hypothetical protein ARALYDRAFT_906905 [Arabidopsis lyrata subsp. lyrata] | 652 | 5e-066 |
| 3IPZ Chain A, Crystal Structure Of Arabidopsis Monothiol Glutaredoxin Atgr | 539 | 6e-053 |
| ABK21451 unknown [Picea sitchensis] | 484 | 1e-046 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q84Y95 Monothiol glutaredoxin-S14, chloroplastic | 652 | 2e-067 |
| Q851Y7 Monothiol glutaredoxin-S7, chloroplastic | 440 | 8e-043 |
| P73056 Uncharacterized monothiol glutaredoxin ycf64-like | 330 | 5e-030 |
| Q1XDA3 Uncharacterized monothiol glutaredoxin ycf64 | 302 | 8e-027 |
| P51384 Uncharacterized monothiol glutaredoxin ycf64 | 300 | 1e-026 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A9NLE0 Putative uncharacterized protein | 484 | 1e-046 |
| C6SZX3 Putative uncharacterized protein | 472 | 2e-045 |
| C6SWD5 Putative uncharacterized protein | 471 | 3e-045 |
| B6TE85 Grx_S14-glutaredoxin subgroup II | 455 | 2e-043 |
| C0P5A2 Putative uncharacterized protein | 455 | 2e-043 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G54900.1 CXIP1 (CAX INTERACTING PROTEIN 1); antiporter/ glutathione disulfide oxidoreductase | 684 | 4e-072 |
| AT4G04950.1 thioredoxin family protein | 281 | 2e-025 |
| AT2G38270.1 CXIP2 (CAX-INTERACTING PROTEIN 2); electron carrier/ protein disulfide oxidoreductase | 264 | 2e-023 |
| AT3G15660.1 GRX4 (GLUTAREDOXIN 4); metal ion binding | 250 | 8e-022 |
| AT3G15660.2 GRX4 (GLUTAREDOXIN 4); metal ion binding | 250 | 8e-022 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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