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Information for unigene UN15254
| FASTA Sequence |
| Unigene ID: UN15254 | Length: 656 |
| SNP | GAATAGATAAAGGAATGTGTGAAAAATCCATTCTGGCAAAAAGCCAGAGACGATGGTCTTGCTCGGTAAGACTTTGAGTAATACAA
GAGGTGATATTCAGCACAAAAAAAATGCAACAAAAACTTTTTTAAGCCAAGACGAAACGAAGAAGTAACTAAACAAAAGATGGTCT
CAACTCAGAACGATTAATCAACCAACAACTACGAACAAGAAATAACAAAGGCAAATCGCTCAAGCTTAGTCGAACAAGCCGAAACC
CAAATCACCATCACTCTCTTCTGCTACTTCTTCCTTCTTCTTCTCCTCAGCGGCAGGTGCAGCCGCGGCAGCACCACCACCGGCAG
CTGGGGCAGCAGCTGAAACTGGAGCACCACCTCCGCCACCAGCACCAACGTTCATGATGAGGTCAGTAACGTTACGCTTCTCAGCC
ATCTTGGCGAATAGCATTGGCCAGTATGACTCAATCTCCACACCAGCAGATTTGACCAAAGTAGCGATCTTGTCGGCCGTGATAGC
AATACCCTCGTCCTCGAGGATCATAACAGCGTAGCTGCAAGCAAGCTCTCCGACCGTCGACATTCTTTTTTCTTTCTTAGACTAGG
ATCGTAAATGCTTTCGCAGAGCGGCTCGAGTGATAATAATTCGCTAGGGTTTCC
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002889384 hypothetical protein ARALYDRAFT_311324 [Arabidopsis lyrata subsp. lyrata] | 543 | 1e-053 |
| NP_199581 60S acidic ribosomal protein P1-3 [Arabidopsis thaliana] | 542 | 2e-053 |
| AAM62534 60S acidic ribosomal protein P1-like protein [Arabidopsis thaliana] | 538 | 5e-053 |
| NP_171618 60S acidic ribosomal protein P1-1 [Arabidopsis thaliana] | 521 | 4e-051 |
| AAM64427 acidic ribosomal protein, putative [Arabidopsis thaliana] | 515 | 2e-050 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8LEQ0 60S acidic ribosomal protein P1-3 | 542 | 8e-055 |
| Q8LCW9 60S acidic ribosomal protein P1-1 | 527 | 4e-053 |
| O23095 60S acidic ribosomal protein P1-2 | 508 | 7e-051 |
| P52855 60S acidic ribosomal protein P1 | 379 | 6e-036 |
| P08570 60S acidic ribosomal protein P1 | 318 | 7e-029 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9DFS7 AT4G00810 protein | 508 | 1e-049 |
| B9RNK0 60S acidic ribosomal protein P1, putative | 398 | 5e-037 |
| Q307Z7 Acidic ribosomal protein P1a-like | 379 | 9e-035 |
| A5AKA4 Putative uncharacterized protein | 376 | 2e-034 |
| B9SEJ7 60S acidic ribosomal protein P1, putative | 376 | 2e-034 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G47700.1 60S acidic ribosomal protein P1 (RPP1C) | 543 | 6e-056 |
| AT5G47700.2 60S acidic ribosomal protein P1 (RPP1C) | 543 | 6e-056 |
| AT1G01100.1 60S acidic ribosomal protein P1 (RPP1A) | 528 | 3e-054 |
| AT1G01100.2 60S acidic ribosomal protein P1 (RPP1A) | 528 | 3e-054 |
| AT1G01100.4 60S acidic ribosomal protein P1 (RPP1A) | 528 | 3e-054 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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