Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN15254

FASTA Sequence
Unigene ID: UN15254Length: 656  SNP
GAATAGATAAAGGAATGTGTGAAAAATCCATTCTGGCAAAAAGCCAGAGACGATGGTCTTGCTCGGTAAGACTTTGAGTAATACAA
GAGGTGATATTCAGCACAAAAAAAATGCAACAAAAACTTTTTTAAGCCAAGACGAAACGAAGAAGTAACTAAACAAAAGATGGTCT
CAACTCAGAACGATTAATCAACCAACAACTACGAACAAGAAATAACAAAGGCAAATCGCTCAAGCTTAGTCGAACAAGCCGAAACC
CAAATCACCATCACTCTCTTCTGCTACTTCTTCCTTCTTCTTCTCCTCAGCGGCAGGTGCAGCCGCGGCAGCACCACCACCGGCAG
CTGGGGCAGCAGCTGAAACTGGAGCACCACCTCCGCCACCAGCACCAACGTTCATGATGAGGTCAGTAACGTTACGCTTCTCAGCC
ATCTTGGCGAATAGCATTGGCCAGTATGACTCAATCTCCACACCAGCAGATTTGACCAAAGTAGCGATCTTGTCGGCCGTGATAGC
AATACCCTCGTCCTCGAGGATCATAACAGCGTAGCTGCAAGCAAGCTCTCCGACCGTCGACATTCTTTTTTCTTTCTTAGACTAGG
ATCGTAAATGCTTTCGCAGAGCGGCTCGAGTGATAATAATTCGCTAGGGTTTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002889384 hypothetical protein ARALYDRAFT_311324 [Arabidopsis lyrata subsp. lyrata]5431e-053
NP_199581 60S acidic ribosomal protein P1-3 [Arabidopsis thaliana]5422e-053
AAM62534 60S acidic ribosomal protein P1-like protein [Arabidopsis thaliana]5385e-053
NP_171618 60S acidic ribosomal protein P1-1 [Arabidopsis thaliana]5214e-051
AAM64427 acidic ribosomal protein, putative [Arabidopsis thaliana]5152e-050

Swiss-Prot top hits (Blast detail)Scoree value
Q8LEQ0 60S acidic ribosomal protein P1-35428e-055
Q8LCW9 60S acidic ribosomal protein P1-15274e-053
O23095 60S acidic ribosomal protein P1-25087e-051
P52855 60S acidic ribosomal protein P13796e-036
P08570 60S acidic ribosomal protein P13187e-029

TrEMBL top hits (Blast detail)Scoree value
B9DFS7 AT4G00810 protein5081e-049
B9RNK0 60S acidic ribosomal protein P1, putative3985e-037
Q307Z7 Acidic ribosomal protein P1a-like3799e-035
A5AKA4 Putative uncharacterized protein3762e-034
B9SEJ7 60S acidic ribosomal protein P1, putative3762e-034

Arabidopsis top hits (Blast detail)Scoree value
AT5G47700.1 60S acidic ribosomal protein P1 (RPP1C)5436e-056
AT5G47700.2 60S acidic ribosomal protein P1 (RPP1C)5436e-056
AT1G01100.1 60S acidic ribosomal protein P1 (RPP1A)5283e-054
AT1G01100.2 60S acidic ribosomal protein P1 (RPP1A)5283e-054
AT1G01100.4 60S acidic ribosomal protein P1 (RPP1A)5283e-054

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
66  50%
 
122  17%
 
72  17%
 
112  17%

Unigene MembersMember information