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Information for unigene UN15273
| FASTA Sequence |
| Unigene ID: UN15273 | Length: 985 |
SSR | | TAGGTCTGAAAGAAAGAAAAACTGAAACAATAAGCTTAAGAAGTAAACAGCTAAACATTACGAGGCAACGAAAGCTGTGGTGATTT
ACTCTTCGTCGTCCTCATCATCATCATCACCACCTGCTGCTCCGTTCAATGCCTTGACTCTCTCGATCAACTTGTTCTTCCTTTCC
TCATAGGTCAACTTCTTCAAATTGTACCTCTTGTGTGCCTTGGGGGCAGGTTTCACGGTCTTCTTGGGGTTGGGGTCAGCACGGAT
AGCTGCATGAACCTTCTTGTACAGCTCCTCCATCTTCTCAGCGTCAACTCCTTTCTTCAAGTACTGACTGAAGTGAGTTTGAAACT
TCTCTGGCTCATCTTCGTTCAACATCTTCATGTAGTTCGAGACATGGCCACCAAAGATGTAGTTCCTGTGGGTCTCAGCATCAAGT
TGTTTGTTCTCTTTGTTGAAACCTGCAAACCTCTTGTCACTGTGGGGGATATCAAGTCCTCCATCCAAAGCACCCTTGAGGGCACC
GAAGACACGGTTCCCTGTGGTGGTCCTGATGAGTCCAACATCAAGAAGAGCACGGAAAGGCCTCCTTGACTCTGTTGGTTCCACGG
AGAACACGGCGAGCCAAAAGAAGACCGGTACAGTAAGCTGCAGCGTAGTTGGTAAGACCAACAGTGAGTCCATACTGAGGCAACTC
ATGAGCGTAAGCAGAGGCCTTGACAATGTCACCGGCTATGCTTGCGGACACGATTTGAGCAACGATGTCTTTGTTGGTGAACCTGA
CAACGAAACGGTACTTGGGTGTGTTGTACTTGTTTTTGTCTTGGTTAATGAGACGGATTCTTGCTCTGTAATCGGTCTTACCAGCT
CTTCTTCTCCTGAACTTGACTTGGTACCTCTTGAAGTATGCATTCGACTTTGATGGCTTCACAAACACCATTGTTTAAGCGAAGCG
AGTAAGCTTTGGTGTGAGAGATGAGTGAGGAGAAGACCC
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002870764 hypothetical protein ARALYDRAFT_916328 [Arabidopsis lyrata subsp. lyrata] | 838 | 2e-087 |
| NP_566767 60S ribosomal protein L5-1 [Arabidopsis thaliana] | 831 | 1e-086 |
| NP_001189970 60S ribosomal protein L5-1 [Arabidopsis thaliana] | 831 | 1e-086 |
| BAH20263 AT3G25520 [Arabidopsis thaliana] | 822 | 1e-085 |
| AAM64753 ribosomal protein, putative [Arabidopsis thaliana] | 812 | 2e-084 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8LBI1 60S ribosomal protein L5-1 | 831 | 5e-088 |
| P49227 60S ribosomal protein L5-2 | 802 | 1e-084 |
| Q6UNT2 60S ribosomal protein L5 | 709 | 6e-074 |
| Q8L4L4 60S ribosomal protein L5-2 | 692 | 6e-072 |
| A2WXX3 60S ribosomal protein L5-1 | 691 | 8e-072 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9DHP6 AT3G25520 protein (Fragment) | 822 | 8e-086 |
| B7FJX5 Putative uncharacterized protein | 722 | 3e-074 |
| B9SEY9 Ribosomal protein L5, putative | 718 | 9e-074 |
| A9PB43 Putative uncharacterized protein | 713 | 3e-073 |
| B9IAZ4 Predicted protein | 713 | 3e-073 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G25520.1 ATL5 (A. THALIANA RIBOSOMAL PROTEIN L5); 5S rRNA binding / structural constituent of ribosome | 837 | 8e-090 |
| AT5G39740.1 60S ribosomal protein L5 (RPL5B) | 808 | 2e-086 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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