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Information for unigene UN15301
| FASTA Sequence |
| Unigene ID: UN15301 | Length: 1116 |
SSR | | CGGACTGGGAACGGCTCTTTCGGGAGCTTTCCCCGGGCGTCGAACAGCCAATTCAGATGCTCTGTGACACACTCGAATGTCGCAAG
GGATCCGATGTTAATTAAAACAAAGCATTGCGATGTCCTCGCGGATGCTAACGCAATGTGATTTCTGCCCAGTGCTCTGAATGTCA
AAGTGAAGAAATTCAACCAAGCGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTA
GTGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCAG
AATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGAATAAGTGGGAGCT
CCGGCACAAGTGAAATACCACTACTTTTAACGTTATTTTACTTACTCCGTGAAGCGGAAGCGGGGTAACAACCCCTTTTTTTAGAT
CCAAGGCTTGCTTCGGCAGGTCGATCCGGGCGGAGGACATTGTCAGGTGTGGAGTTGGCTGGGAACGATATCACTGTGAAATCCAC
TGGGAAATTGGCGGAATGCATCGCGTCGAAACGGGCTCTTTCGAAGCTGAATTTGTCTGAGAATGAACTCAAAGACGAAGGGACAA
TCTTGATCGCAGAGGCGGTTGAATGTCTTGACCAGTTGGTTGAAGTTGACATGAGCACCAACATGATGAGAAGAGCTGGGGCAAGG
GCCTTGGCACAAAGTGTTTTGAAGAAACAGAGTTTCAAGCTTCTGAACATCAATGGGAACTTCATATCTGAGGAAGGTGTTGACGA
GGTGAATGACATGTTTAAGTAGTCCCCGGACAAGCTTGGTCCTCTGGATGATAATGACCCTGAAGGAGAAGATTTTGAAGATGAAG
AGGAAGAAGAGGAAGGTGATGAAGACAATGAGCTGGAAGCAAAGCTAGGAGGTCTGAAAATCAAGCAAGAGGAGGAATAGGGAGAG
GTAACATGAGTTGGTGCTCTTGTTGCTATATTAGTAGGTTCAGTTTGATCTCTCTCTCTCTCTTGCACTCTTGGTGGTTAACGT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002876710 RANGAP1 [Arabidopsis lyrata subsp. lyrata] | 655 | 3e-066 |
| NP_191872 RAN GTPase-activating protein 1 [Arabidopsis thaliana] | 632 | 2e-063 |
| XP_002520743 leucine rich repeat-containing protein, putative [Ricinus communis] | 493 | 2e-047 |
| CAN73875 hypothetical protein VITISV_039541 [Vitis vinifera] | 478 | 1e-045 |
| XP_002275003 PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] | 477 | 1e-045 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LE82 RAN GTPase-activating protein 1 | 632 | 7e-065 |
| Q9M651 RAN GTPase-activating protein 2 | 441 | 9e-043 |
| Q7RTR2 Protein NLRC3 | 132 | 6e-007 |
| Q555D2 Uncharacterized protein DDB_G0274915 | 126 | 3e-006 |
| O42970 Uncharacterized serine-rich protein C1E8.05 | 126 | 3e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9S424 Leucine rich repeat-containing protein, putative | 493 | 1e-047 |
| A5AWW1 Putative uncharacterized protein | 478 | 7e-046 |
| A7M8K2 Ran GTPase-activating protein 2 | 476 | 1e-045 |
| A5JGX7 RAN GTPase-activating protein 1 | 472 | 4e-045 |
| A7M8K3 Ran GTPase-activating protein 1 | 471 | 5e-045 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G63130.1 RANGAP1 (RAN GTPASE ACTIVATING PROTEIN 1); RAN GTPase activator/ protein binding | 633 | 4e-066 |
| AT5G19320.1 RANGAP2 (RAN GTPASE ACTIVATING PROTEIN 2); RAN GTPase activator | 441 | 8e-044 |
| AT3G06000.1 leucine-rich repeat family protein | 306 | 4e-028 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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