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Information for unigene UN15302
| FASTA Sequence |
| Unigene ID: UN15302 | Length: 909 |
SSR | | GGAGAGAAGAGAGGAAACCAAAGGCGACATAGACGAGGAGGAGGAAGAAGAAGAAGAAGAAGATGAGAGAGACGGTGAAGTTGATA
AGCATGGAGGGTTTCGAGTTCGTGATCGACAAGGAAGCCGCCATGGTTTCACAGACTATAAGAAGCATGCTCACTTCTCCAGGTGG
GTTTTCGGAGTCGAAAGATGGCGTGGTGACTTTCCCTGATGTCAGCACAACAATTCTTGAGAAGATTTGCCAGTACTTCTATTGGT
CTCTTCAATACTCCAGGTCCATTCTCTGTCTCTCACTTGCTCTAATCTGATCTCTAGAACCTAATCACCAGTTTCATCTATCTAAG
TTTCACTAATTAGTTTCATGCCAAACTCTTTACCCCTATTCTATTCAATTTCACAGTAAAGTTTCCATCTTTAGGAGTCTCTTGTG
CCATTGCAGTGTTAAAGGAAAGTGATATTGTTTACAATCATGCTGCTTTGAGATTTTCCCACTTTCAGAACTCAGCTGTCTCAATC
TTCACTTCTTCTTAATAGTTTGTATTTTCTCTTACGGAGGCAAAGAGACCGAGTTCCACATTGAGCCTGAGCTGACCTTGGAGCTC
ATGATGGCTGCTAATTATCTTCACACTTGAAAGAGCTTATTAACATTATTAAACTCTTTATTCTGGGTAGTCTAGTTTTTTTTTGT
AACCATAAGTTGTGAATCCCCCGGAGCACTTCGTGTGGGGTTATTATAAGTGTAAGCGTTTGACTCAAAAATGGTTTGTGCTTTAA
CTATTGAATAGCTCCGACGGATAGTTGTTTTTTTTTATTTACTAGTTATGACTATTTACCGCCCCATCAATGTTCTTGGGGGGTTT
TTAGTTGTTGCCTTTCAAACAGCTTAAGTTAAGCACAACATTTTATGCT
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_568900 transcription elongation factor B, polypeptide 1 [Arabidopsis thaliana] | 357 | 8e-032 |
| XP_002520493 Transcription elongation factor B polypeptide, putative [Ricinus communis] | 300 | 3e-025 |
| XP_002314149 predicted protein [Populus trichocarpa] | 291 | 4e-024 |
| XP_002282124 PREDICTED: hypothetical protein [Vitis vinifera] | 287 | 1e-023 |
| ACU13523 unknown [Glycine max] | 284 | 2e-023 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9USX9 Elongin-C | 165 | 7e-011 |
| Q2KII4 Transcription elongation factor B polypeptide 1 | 162 | 2e-010 |
| Q15369 Transcription elongation factor B polypeptide 1 | 162 | 2e-010 |
| P83940 Transcription elongation factor B polypeptide 1 | 162 | 2e-010 |
| P83941 Transcription elongation factor B polypeptide 1 | 162 | 2e-010 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q9FIG0 Putative elongin protein | 357 | 6e-032 |
| B9S3C4 Transcription elongation factor B polypeptide, putative | 300 | 2e-025 |
| B9HPC0 Predicted protein | 291 | 3e-024 |
| C6SWA0 Putative uncharacterized protein | 284 | 2e-023 |
| B8BIM3 Putative uncharacterized protein | 282 | 3e-023 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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