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Information for unigene UN15319

FASTA Sequence
Unigene ID: UN15319Length: 2294 SSR 
CGAACGAATAGTCCCTGAATAATTGATTGGACGCTATGCCCTATCCGACCGCACACTAGGTTCTACCTGATTGTATGCTTTAAAGC
CTAGTGTAATTTTGAACAGAGCTAAAATCAAAACGAAGTGTTTATTTTACGCATTTGCCTACGTAAACGGAAGTGATATTAACTGA
AATGGATACAATTTCATTTATTATTTCGAGAAATCCAAAACGAAAATAGCCGCCAGGTTGGGTTTTATTTAGTGCTTTTGCGATGT
AGGCATGGCAAGAGATACTGAAGTTGGAATATCCTTCCACTGTTGTGTCACAGTCTTGATCTGAGTGAAAAAGTCTACTCCAGCTT
TGCCATAAAAGTTCAGGTCTCCTGCAAATGAAGCTTTGTTCCCAGTAAAGGAGAAGAACGGTAACGGAACCGGGATTGGAACGTTT
ATACCAATCTGTCCTGCTTCTATTTCCATCTGGAACTTTCTTGCCGCTGCGCCCGATGCAGTGAAAATTGCAGCACCGTTGCCATA
CTTGTTTCTATTCAGTATGTCTATGGCTTCATCAAAGCTGCTTGCCTCCATGCATACAAGAACGGGGCCAAATATTTCTTCCTTGT
AACACTCCATGTCTGGGGTAACACCAGATAAAATGGTAGGACCGATAAAATTCCCTTTCTCGTATCCAGGAACCACAATATTTCTT
CCGTCAAGCAACAGTTTAGCACCATCGTCCACACCAGACTGAATCAAGCGACATATCCTTTCTTTGGCCTGTTTACTAATCACAGG
ACCCAGGTCTGCATCTGGCTCTGTTCCACATGAGACTTTAAGGGCTTTAGCTCGCTCGACAAGTTTATCCTCCCATGATTTTGAAC
TGCCAACAAAGACCACTGTACTCAGAGCCATGCATCTCTGTCCAGCGGCACCAAATCCAGCAGCAAGTAGCGCATTCAAAGTAGCG
TCGACGTTGGCATCAGGCAGGACAACTCCATGATTTTTCGCCCCCATATTTGACTGAATACGTTTTCCTTTGGCTGCTGCTCTTGC
ATATATATGCATTCCAGCAGTGTTTGAGCCAACAGAGGAGACAGCCCTGATATCATCATCATCATCACAGATAGCATTCACAGTAT
CATTGGTACCGTGAACGATATTGAGAACCCCGTCAGGTAATCCAGCTTCCATTGCGAGCTCCGCAAGCATTACAGAAGCACCAGGA
TCCTTTTCTGATGGCTTTAAGACAAAGGTATTGCCACATGTCACCGCAATGGGAAACATCCATAAAGGAATCATAGCAGGAAAGTT
GAAAGGACAAATGCCAGCACATACACCTAATGGCTCCCTAAGACTATACGTATCGACTCCGTTTGACACATTGGGGACATATTCTT
TCTTTGGCCTGTTTACTAATCACAGGACCCAGGTCTGCATCTGGCTCTGTTCCACATGAGACTTTAAGGGCTTTAGCTCGCTCGAC
AAGTTTATCCTCCCATGATTTTGAACTGCCAACAAAGACAACTGTACTCAGAGCCATGCATCTCTGTCCAGCGGCACCAAATCCAG
CAGCAAGTAGCGCATTCAAAGTAGCGTCGACGTTGGCATCAGGCAGGACAACTCCATGATTTTTCGCCCCCATATTTGACTGAATA
CGTTTTCCTTTGGCTGCTGCTCTTGCGTATATATGCATTCCAGCAGTGTTTGAGCCAACAAAGGAGACAGCCTGATATCATCATCA
TCACAGATAGCATTCACAGTATCATTGGTACCGTGAACGATATTAAGAACCCCGTCAGGTAGTCCAGCTTCCATTGCGAACTCCGC
AAGCATTACAGAAGCACCAGGATCCTTCTCCGATGGCTTTAAGACAAAGGTATTGCCACACGTCACCGCAATGGGAAACATCACTT
TAGTGTGCACTTTTCCCTCATGTGGAACCGAAGAAAGTTCCACGTCCAATAGCGTCGGCGTTTGCGTCTCACAAGGCAGCCTCGTT
AAGGTATTGGTCAGCAAGTTGGACTCTCTTGACGTTCTCTTGCTCCATCACAAGCATGTTACCGTACTCCATAAGCTTGGCAAGAG
TCATCTCTGGTTGCTCGAACACTGGAGGAGCTTCCCTTGAGTTCACCAGCCTCTTGCTTATCTTCTCCACTCCAAGTCCCTCGACG
AACTTCCTCACTTCATCATCGTACACTCTAGCCCTCAATGCACCAAAGAAATCGATGGATTGGCCAGGGAACTGGTCAACAAGCGT
GACAATGTCTTCATCCTTGACACCGTCAGTCCTGAAGATACCCTTGGACACACCGATC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002885906 ALDH6B2 [Arabidopsis lyrata subsp. lyrata]18762e-207
NP_179032 Methylmalonate-semialdehyde dehydrogenase [acylating] [Arabidopsis thaliana]18663e-206
NP_001077887 Methylmalonate-semialdehyde dehydrogenase [acylating] [Arabidopsis thaliana]18663e-206
XP_002518343 methylmalonate-semialdehyde dehydrogenase, putative [Ricinus communis]17633e-194
XP_002300008 predicted protein [Populus trichocarpa]17581e-193

Swiss-Prot top hits (Blast detail)Scoree value
Q0WM29 Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial18661e-207
P52713 Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial12925e-141
Q07536 Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial12792e-139
Q9EQ20 Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial12763e-139
Q02253 Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial12754e-139

TrEMBL top hits (Blast detail)Scoree value
A8MQR6 Uncharacterized protein At2g14170.218662e-206
B9RX74 Methylmalonate-semialdehyde dehydrogenase, putative17632e-194
B9GH76 Predicted protein (Fragment)17587e-194
A9PF49 Putative uncharacterized protein17264e-190
B9HN83 Predicted protein (Fragment)17264e-190

Arabidopsis top hits (Blast detail)Scoree value
AT2G14170.1 ALDH6B2; 3-chloroallyl aldehyde dehydrogenase/ methylmalonate-semialdehyde dehydrogenase (acylating)/ oxidoreductase18679e-209
AT2G14170.2 ALDH6B2; 3-chloroallyl aldehyde dehydrogenase/ methylmalonate-semialdehyde dehydrogenase (acylating)/ oxidoreductase18679e-209
AT2G14170.3 ALDH6B2; 3-chloroallyl aldehyde dehydrogenase/ methylmalonate-semialdehyde dehydrogenase (acylating)/ oxidoreductase17021e-189
AT2G39730.2 RCA (RUBISCO ACTIVASE); ADP binding / ATP binding / enzyme regulator/ ribulose-1,5-bisphosphate carboxylase/oxygenase activator5675e-058
AT2G39730.3 RCA (RUBISCO ACTIVASE); ADP binding / ATP binding / enzyme regulator/ ribulose-1,5-bisphosphate carboxylase/oxygenase activator5675e-058

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
65  42%
 
83  25%
 
113  25%
 
101  8%

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