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Information for unigene UN15330
| FASTA Sequence |
| Unigene ID: UN15330 | Length: 855 |
SSR | | GCACACAACAATTATATATAATCATTTCCTCAAATAGAATCGGATCTTCTCCATTAACAGATCCCGTAAAACCACAAAGAGAAAAA
AAAACAAAGCGGGGGGGTCGCTCCGGAAGAGAAGAAACAGAGACACAGAGCGCGACCACAGCCAATAACTCTTCAGACAGACAGAC
AAACAAAACAATCTTAAAACTGAACTCTTGAAGAATAAGTCTGTCCGAAAGAACAAGAAGAAGGAACAACATTGAGGAAGACTCTT
GTAGCACCATCAGTAGTAGTAATGGAGAAAGAAAGAGATTGACCATCGAGATAAGCGTTTGATTGCCAATTAGCTCCCCAATTGCG
AGACATAGCTAACCAGCCAGTCTTTGATCCTTTAATGGATACAGACTGAATCGAACCAGCTCCTCCTACGTTCGATATGTTCACTA
GCTCGAAGTAATCTCTTCCGTTGATTCTGAATCTCACTCCACCTCTCTTGTAACAGCTTACTCTTTGGAACACGACGGGGACGATT
CCTCCTCTGTAGATTCCGATCTTTTCCCAAGCGGGTTGTGCCATGTCGAAATGTTTGAGCGGCGGGTTGCACCAACCACCGTCGTT
ATTATCCCGTACCCCGCCGAGTAGAGATCTCCGTACCCACAAGCTCCGCCCATTGTTCCAGAAGCGTCACTCCCTCCATAGAATGT
GGCATGACCATTGGTTAAACCAGAAGGCCTAAACCCATCAACCGCCACAAAAAGAGCGGCCAAAAGCGCCAATCCAGCTAGAGACT
TTGCCATTGCTTATAACTCGTTGAAGAAGAAAGAGATTATGATGATGATGATGATCGAGTGAAGGAGAGAGACTTGTTTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002893092 Alpha-expansin 11 precursor [Arabidopsis lyrata subsp. lyrata] | 712 | 5e-073 |
| NP_173446 expansin-A11 [Arabidopsis thaliana] | 710 | 9e-073 |
| AAM61082 Alpha-expansin 11 precursor (At-EXP11) (AtEx11) (Ath-ExpAlpha-1.14) [Arabidopsis thaliana] | 710 | 9e-073 |
| XP_002510588 Alpha-expansin 11 precursor, putative [Ricinus communis] | 646 | 2e-065 |
| AAO15998 expansin [Glycine max] | 638 | 2e-064 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LG16 Alpha-expansin 11 (At-EXP11) (AtEx11) (Ath-ExpAlpha-1.14) | 710 | 6e-073 |
| B9R8E5 Alpha-expansin 11, putative | 646 | 2e-065 |
| C6T9D4 Putative uncharacterized protein | 638 | 1e-064 |
| Q8GZD3 Expansin | 638 | 1e-064 |
| B9H521 Putative uncharacterized protein PtrEXPA18 | 622 | 1e-062 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G20190.1 ATEXPA11 (ARABIDOPSIS THALIANA EXPANSIN 11) | 711 | 3e-075 |
| AT1G26770.1 ATEXPA10 (ARABIDOPSIS THALIANA EXPANSIN A 10); structural constituent of cell wall | 490 | 1e-049 |
| AT1G26770.2 ATEXPA10 (ARABIDOPSIS THALIANA EXPANSIN A 10); structural constituent of cell wall | 490 | 1e-049 |
| AT1G69530.4 ATEXPA1 (ARABIDOPSIS THALIANA EXPANSIN A1) | 489 | 2e-049 |
| AT1G69530.1 ATEXPA1 (ARABIDOPSIS THALIANA EXPANSIN A1) | 485 | 4e-049 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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