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Information for unigene UN15339
| FASTA Sequence |
| Unigene ID: UN15339 | Length: 953 |
SSR | | CATTGGATGGATGCCCGGGCATTGAGAAGGAAGGACGCTTTCAGAGGCGAAAGGCCATGGGGAGATACCGTCTGTGATCCATGGAT
CTCCGATCCGTTTCTTCTTGGTTAATCAAATCTCAGGTAAATAGATGCAAGCTGCGATTCGTTCGTTTGTGTCCGGTGGAAACGTT
GTGAAAGCGTCTCTGCTGCAACATGTCCGTGTGATTAACCCGGCGATCCAGCCTTCTGTGTTTTGCAAACGCTCCGAGTCGACTCA
GTCATCGCGTATGGAGGAGCATGGGTTCGAGAGCACAACCATCTCTGATGTTATGAACGCCAAAGGCAAAAGTGCCGATGGATCTT
GGCTTTGGTGTACTACTGATGACTCTGTTTATGACGCTGTTAAATCCATGACACAACACAATGTTGGTGCCTTGGTGGTTGTGAAA
CCTGGTGAGCAACAGTCTCTTGCTGGTATCATTACAGAGAGAGATTATCTGCGGAAGATCATAGTGCAAGGAAGATCATCCAAATC
AACAAAAGTAGGAGATATTATGACTGAAGAGAATAAGCTTATCACCGTGACACCAGAGACCAAGGTGTTGCGTGCTATGCAGCTAA
TGACTGATAACCGGATTAGGCACATTCCAGTGATAAAGACAAGGGTATGGTGGGAATGGTGTCGATAGGAGATGTGGTTCGTGCAG
TGGTGACTGAGCATCGCGAGGAGCTTAACCGCCTAAACGCGTTTATCCAGGGAGGTTACTAACGTTGCCGACTGGTAAGGAGAAGT
GTTACTTTCCGTGTGTTATATCCACTGCTTGATGATCCTCTAAAGTAAGATCGAATGTAAATATGGAGTCTTCTCTGATGTTTGTT
GTTGTTGTTGTCTGTCGTTTTCATTGGTAAACTTGTCAAAGACTTGGTTTTTGAGCTACTCTCCGCAAGATAATAAAACAAATGGA
CTCTACT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_196647 CBS domain-containing protein [Arabidopsis thaliana] | 801 | 3e-083 |
| XP_002873481 CBS domain-containing protein [Arabidopsis lyrata subsp. lyrata] | 798 | 7e-083 |
| ACJ84966 unknown [Medicago truncatula] | 690 | 2e-070 |
| AAT08729 CBS1 [Hyacinthus orientalis] | 688 | 4e-070 |
| XP_002319991 predicted protein [Populus trichocarpa] | 686 | 6e-070 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LEV3 Uncharacterized protein At5g10860, mitochondrial | 801 | 1e-084 |
| P93276 Uncharacterized mitochondrial protein AtMg00030 | 181 | 1e-012 |
| O34682 Uncharacterized protein ylbB | 143 | 3e-008 |
| P50100 Uncharacterized protein MK0525 | 137 | 1e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B7FJN7 Putative uncharacterized protein | 690 | 2e-070 |
| Q676Z5 CBS1 (Fragment) | 688 | 3e-070 |
| B9I794 Predicted protein | 686 | 4e-070 |
| B9SK70 Putative uncharacterized protein | 676 | 6e-069 |
| A0T1V6 CBS domain-containing protein | 665 | 1e-067 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G10860.1 CBS domain-containing protein | 801 | 1e-085 |
| AT1G47271.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: CBS domain-containing protein (TAIR:AT5G10860.1); Has 5358 Blast hits to 5270 proteins in 1084 species: Archae - 620; Bacteria - 3536; Metazoa - 1; Fungi - 100; Plants - 159; Viruses - 0; Other Eukaryotes - 942 (source: NCBI BLink). | 379 | 1e-036 |
| ATMG00030.1 hypothetical protein | 181 | 9e-014 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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