Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN15346

FASTA Sequence
Unigene ID: UN15346Length: 1491 SSR 
GTCCAAATCGATCGATCTTTATTATTAATAGGACGGAGACTCACATGTGTATATAAAGAAGAATACAATAATAAATCAAAAATGAA
ACCTTATTGCAACAATATACAGATAAACACATCAACTGGTTTGGCCACAAAAAGTGTCAACCTTCTCTTGAAACATTCAAAATAAT
ACTGGTTTAATGCAGCCAGTTGAAAAACACGGCTTGATACACACAAAAAGATGTAAACGATCGATCTGAAGATTCACTTGACGTTT
TGTGAAGTTGTACATTTATGTCTTAATCGAGCTTCACGTTTGAGTATAGGAGCGTGTCCTTGGTCAAAGGCATGTACATAAGGAAG
TACACCCCAAGGATAGTTGCAATGAGAAGGATAATTCCAGTTAACCATGCAAGCGTCAGCCTAACGAGTATAACTTGAGCGATAAT
GGCTGCACTTGGAACACCCTCTACCTCAGCCATAGACCTTGCAGATGAACGAGATGAAGACTCCACGCTCAGCAGATTTGCTGATT
CTTGATTTACTCTCTCATCAAGGACGATCACTCCAACAATTTGGCCTTTGTGAGATGTCTCCAACAGATCAAATAGCTTTGATAGT
GTGGCAAGCAATACATCCATCCCTTGCTTAGCCATACCTTGCCCATACTCCTGTGCTAAAGCATTAATACCGCCAAAGCGTCCAAC
CGTTAGTTCAGCAGGTCTCTCAATACCATGAAGGTTGACTGCTCCTCTGATATTCTTGTATAGATCCAAAAGGTTCAATGCAAATT
TCCTCTCTGCTTCCTTTTCCAAATGGAACTCCACATTAGCACCATCAGCCAGAGAGATACTCAGCAATCCAGTCAATGGTTCAGCA
GAGCCAGTAACATAGGACCCACCCAACCAAGATGCAAACTCATTCATGTCATTGTCAGTCACATCAGATGAGGGTTCGTTAATAGA
CACAACAGCAACTCCACTTCCTGGAAGTTCAATATCAGCATTGTAAGAGTCAGAACTGATACTGCCTCTTATGGAATTGCCCAAGA
AAGAATGACTAGTGTAGGCCCACAAGCGCATCATGAGCTCCGGCGATTTCTAGAACAAAAGCAGCACGAGGCCTCTCAAACGGATT
GGGCTTTAGAATCTTGTTCAGCTTGGAGGAGCCAAGGGCAGTCAAAGTAGATGGAGGTGCAAAACCCAACAAGGCAGATACTGATG
CAGATACCTCAGAGAGCGACATGGGAAGCGCCTCGGCTGATGGTGGACGAAGATATTGGTTGTTGGATCCATCAATAAAGAAAACA
GAAGAGGTAGCTTCTCCCCTGGAGTGAAGGGTGAGAAGCAATGAGACGACGAATATGCAGAAAGCTTTCATCTTTACAAAAAAAAA
CAAGAAGTCGACGTGCAGAGAGAGAGAGAGAGATCGGAGTTTATCTATCTATGTATCTGGCGAGATGTTTTATGGGAGGAGACGAC
CCAAGATTTCGTGATCGATGTGGTGGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002885613 hypothetical protein ARALYDRAFT_898953 [Arabidopsis lyrata subsp. lyrata]10283e-109
NP_189058 putative type 1 membrane protein [Arabidopsis thaliana]10193e-108
XP_002518115 PMP, putative [Ricinus communis]6062e-060
XP_002297811 predicted protein [Populus trichocarpa]6001e-059
XP_002304710 predicted protein [Populus trichocarpa]5946e-059

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9ZSJ7 AT3g24160/MUJ8_1610192e-108
B9RWJ6 PMP, putative6062e-060
B9GME5 Predicted protein6008e-060
A9PHL4 Predicted protein5944e-059
C6T924 Putative uncharacterized protein5164e-050

Arabidopsis top hits (Blast detail)Scoree value
AT3G24160.1 PMP (PUTATIVE TYPE 1 MEMBRANE PROTEIN)10209e-111

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  25%
 
111  25%
 
72  50%

Unigene MembersMember information