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Information for unigene UN15388
| FASTA Sequence |
| Unigene ID: UN15388 | Length: 1317 |
SSR | | GGATTGTGATTCATATCGGAAAACCTCCATCGCTTCTTCGCTTGTTGTTTGATTTTGCATCTGAGAGAGAGAGACCAGATCCGAAA
GGAGGAAGCACAGAAAATGCAATCAAGGCATGGCCAATCGTCGTATCGAGATCGGACGGAGGAGTTCTTCGGCATCGTTGAAACTC
TGAGGAGATCAATTGCTCCGGCCGCGGCGAATAATGTGCCGTATGGCGGTGGAAGGAGAGAGGATCCGAGATCCGCCGTGGCAAAT
CAATCGGAGTTCAAAAAGAGAGCTGCTGTCATCGGTTTAGCTATTAGCCAGACGTCTCTGAAGCTTTCCAAGCTTGCTCAACTGGC
AAAGAGATCATCAGTTTTTGATGACCCCACACGGGAGATACAAGAGCTGACGGCTGTTATCAAACAAGAGATCTCTTCTCTGAATT
CCGCTCTGATCGACCTTCAAGCTGTTCGCAACTCCCATAATGATGAACGGACCATCTCCCGAGACACAACTACTCACTCCGCAACT
GTTGTTGACGATCTTAAGAATCGCTTGATGGACACTACCAAAGAGTTTAAGGATGTTCTTACTTTGAGAACCGAGAACATGAAGAT
CCATGAAATTCGAAGGCAAAGATTCACGTCTAACCCTTCTAAAGAATCAACAAACCCGTTTGTTCGCCAGCGCCCTTTGGCTTCTA
AGCCCGCTGCTAGTCAACCTGCTCCTCTTCCATGGGCAAGCAGCTCTTCTTCATCATCCTCTCAGTTAGTCCCTAGGAGACAGGGA
GAGGCCGAATCTTCTCCATTGTTGCAGCAGAGTCAACAGCAACAACAACAGATGGTCCCGTTGCAAGACACTTATATGGAGAGCCG
CGCAGAAGCTCTACACAACGTAGAATCAACAATCCATGAGCTAAGCAATATCTTCACACAACTAGCTACCATGGTTTCTCAGCAAG
GGGAGATCGCCATCAGGATCGATCAGAACATGGAAGATACATTGGCTAACGTGGAAGGTGCACAGAGCCAATTGGCCAGGTATCTC
AACAGTATATCGTCAAACCGATGGCTCATGATTAAGATTTTCTTCGTACTGATTGCATTTCTCATGGTTTTCCTCTTCTTCGTGGC
CTAATATTGAGATCTTAAAAAGACATATATTCTAAAAAAGAGTTTCAAACATCTAGACATGGTTCTCTTTTCTGTCGTATCTTATT
GACATGTAAAGACTAGATAAAAGGATCTTTATGCTCTATGTTCAGATCAGTGGATATATATTGCCAAATTTTTATGTAAAATTGAT
TTTTGCTGCCAGAACGCTTTTGTGATT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_189078 syntaxin-32 [Arabidopsis thaliana] | 1335 | 6e-145 |
| XP_002880717 hypothetical protein ARALYDRAFT_481441 [Arabidopsis lyrata subsp. lyrata] | 1335 | 6e-145 |
| XP_002883519 hypothetical protein ARALYDRAFT_899015 [Arabidopsis lyrata subsp. lyrata] | 1335 | 6e-145 |
| XP_002284775 PREDICTED: hypothetical protein [Vitis vinifera] | 1178 | 9e-127 |
| XP_002515572 syntaxin, putative [Ricinus communis] | 1164 | 4e-125 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LK09 Syntaxin-32 | 1335 | 2e-146 |
| Q9FFK1 Syntaxin-31 | 698 | 2e-072 |
| Q01590 Integral membrane protein SED5 | 379 | 2e-035 |
| Q20797 Putative syntaxin-3 | 279 | 7e-024 |
| Q24509 Syntaxin-5 | 275 | 2e-023 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RPA3 Syntaxin, putative | 1164 | 3e-125 |
| A9P7V8 Putative uncharacterized protein | 1100 | 7e-118 |
| B9ILI6 Predicted protein | 1084 | 5e-116 |
| A5AQC8 Putative uncharacterized protein | 1028 | 2e-109 |
| C5XMQ4 Putative uncharacterized protein Sb03g003820 | 1011 | 1e-107 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G24350.1 SYP32 (SYNTAXIN OF PLANTS 32); SNAP receptor | 1336 | 2e-147 |
| AT5G05760.1 SYP31 (SYNTAXIN OF PLANTS 31); SNAP receptor | 699 | 1e-073 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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