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Information for unigene UN15434
| FASTA Sequence |
| Unigene ID: UN15434 | Length: 1092 |
SSR | | GATACGAGTCGATCACCAAGGGTAACCCGATGTGAAATGAGCTGTCTGTTCCTGAAAACACCCTCTACTCATGGGATCCCAAGTCG
ACTTACATCCACGAGCCACCATACTTCAAGGACATGACCATGGATCCTCCAGGTCCACACAGTGTGAAGGATGCTTACTGTTTGCT
CAACTTTGGGGACAGTATCACCACTGATCACATCTCTCCAGCTGGTAACATCCAAAAGGACAGTCCAGCTGCAAAATATCTCGTGG
AGCGTGGCGTTGATCGCAAAGACTTCAACTCATATGGAAGTCGCCGTGGGAATGACGAGATAATGGCCAGGGGAACTTTTGCTAAC
ATCCGTATCGTTAACAAGCTCATGAATGGGGAAGTTGGACCCAAGACTGTTCACATTCCTTCTGGAGAGAAGCTCTCAGTCTTTGA
CGCAGCCATGAGGTACAAGTCATCTGGAGAAGACACGATTATTCTAGCTGGAGCCGAGTATGGAAGTGGTAGCTCACGTGATTGGG
CTGCTAAGGGACCTATGCTACAGGGTGTGAAAGCAGTGATTTCAAAGAGTTTTGAAAGGATTCACCGAAGCAACTTGGTGGGAATG
GGAATCATCCCGTTGTGCTTTAAGTCCGGTGAAGATGCAGACACACTTGGATTGACGGGTCATGAACGCTACACGATCCATCTCCC
AACCGATATATCAGAGATAAGACCTGGCCAAGATGTTACCGTCACTACAGACAACGGAAAGTCTTTCACTTGCACAGTCCGCTTCG
ACACTGAGGTGGAATTGGCATACTTCAACCATGGAGGTATACTTCCATATGTCATCAGAAACTTGAGCAAGCAGTAGTGAAAAGGT
GAAAGGAACCCACGCATGTTTTTTAATAAAGAGTAAAGGAGCTTTACGACCTGTTTTCAAAATGTTATTTTTTTAAGGAAGGGGCA
GATAAGTCTGTCGAGGAGATCGATTTCCTGCCATATGAGATTTCAGTTGTTAGTTTACTCGTATCGCTCCCTTTAAGTTTGTGCAA
CTTGCAGGACATGAACATATTATTTTCCGAAAGAAATAAAAACGAATCTCTCTCTCTCGG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_178634 aconitate hydratase 2 [Arabidopsis thaliana] | 1462 | 8e-160 |
| AAD25640 cytoplasmic aconitate hydratase [Arabidopsis thaliana] | 1462 | 8e-160 |
| BAD94991 cytoplasmic aconitate hydratase [Arabidopsis thaliana] | 1462 | 8e-160 |
| XP_002883704 hypothetical protein ARALYDRAFT_480186 [Arabidopsis lyrata subsp. lyrata] | 1457 | 3e-159 |
| XP_002870438 predicted protein [Arabidopsis lyrata subsp. lyrata] | 1415 | 2e-154 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SIB9 Aconitate hydratase 2, mitochondrial | 1462 | 4e-161 |
| P49608 Aconitate hydratase, cytoplasmic | 1348 | 6e-148 |
| Q6YZX6 Putative aconitate hydratase, cytoplasmic | 1348 | 6e-148 |
| O04916 Aconitate hydratase, cytoplasmic (Fragment) | 1315 | 4e-144 |
| Q42560 Aconitate hydratase 1 | 1294 | 1e-141 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q56WE8 Cytoplasmic aconitate hydratase (Fragment) | 1462 | 6e-160 |
| B8BBF3 Putative uncharacterized protein | 1348 | 9e-147 |
| B9FZG0 Putative uncharacterized protein | 1348 | 9e-147 |
| B1Q486 Putative aconitase | 1343 | 4e-146 |
| Q2PEW2 Putative cytoplasmic aconitate hydratase (Fragment) | 1339 | 1e-145 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G05710.1 aconitate hydratase, cytoplasmic, putative / citrate hydro-lyase/aconitase, putative | 1463 | 2e-162 |
| AT4G35830.1 aconitate hydratase, cytoplasmic / citrate hydro-lyase / aconitase (ACO) | 1295 | 7e-143 |
| AT4G35830.2 aconitate hydratase, cytoplasmic / citrate hydro-lyase / aconitase (ACO) | 1295 | 7e-143 |
| AT4G26970.1 aconitate hydratase/ copper ion binding | 1275 | 2e-140 |
| AT5G54950.1 aconitate hydratase-related / citrate hydro-lyase-related / aconitase-related | 241 | 1e-020 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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