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Information for unigene UN15434

FASTA Sequence
Unigene ID: UN15434Length: 1092 SSR 
GATACGAGTCGATCACCAAGGGTAACCCGATGTGAAATGAGCTGTCTGTTCCTGAAAACACCCTCTACTCATGGGATCCCAAGTCG
ACTTACATCCACGAGCCACCATACTTCAAGGACATGACCATGGATCCTCCAGGTCCACACAGTGTGAAGGATGCTTACTGTTTGCT
CAACTTTGGGGACAGTATCACCACTGATCACATCTCTCCAGCTGGTAACATCCAAAAGGACAGTCCAGCTGCAAAATATCTCGTGG
AGCGTGGCGTTGATCGCAAAGACTTCAACTCATATGGAAGTCGCCGTGGGAATGACGAGATAATGGCCAGGGGAACTTTTGCTAAC
ATCCGTATCGTTAACAAGCTCATGAATGGGGAAGTTGGACCCAAGACTGTTCACATTCCTTCTGGAGAGAAGCTCTCAGTCTTTGA
CGCAGCCATGAGGTACAAGTCATCTGGAGAAGACACGATTATTCTAGCTGGAGCCGAGTATGGAAGTGGTAGCTCACGTGATTGGG
CTGCTAAGGGACCTATGCTACAGGGTGTGAAAGCAGTGATTTCAAAGAGTTTTGAAAGGATTCACCGAAGCAACTTGGTGGGAATG
GGAATCATCCCGTTGTGCTTTAAGTCCGGTGAAGATGCAGACACACTTGGATTGACGGGTCATGAACGCTACACGATCCATCTCCC
AACCGATATATCAGAGATAAGACCTGGCCAAGATGTTACCGTCACTACAGACAACGGAAAGTCTTTCACTTGCACAGTCCGCTTCG
ACACTGAGGTGGAATTGGCATACTTCAACCATGGAGGTATACTTCCATATGTCATCAGAAACTTGAGCAAGCAGTAGTGAAAAGGT
GAAAGGAACCCACGCATGTTTTTTAATAAAGAGTAAAGGAGCTTTACGACCTGTTTTCAAAATGTTATTTTTTTAAGGAAGGGGCA
GATAAGTCTGTCGAGGAGATCGATTTCCTGCCATATGAGATTTCAGTTGTTAGTTTACTCGTATCGCTCCCTTTAAGTTTGTGCAA
CTTGCAGGACATGAACATATTATTTTCCGAAAGAAATAAAAACGAATCTCTCTCTCTCGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_178634 aconitate hydratase 2 [Arabidopsis thaliana]14628e-160
AAD25640 cytoplasmic aconitate hydratase [Arabidopsis thaliana]14628e-160
BAD94991 cytoplasmic aconitate hydratase [Arabidopsis thaliana]14628e-160
XP_002883704 hypothetical protein ARALYDRAFT_480186 [Arabidopsis lyrata subsp. lyrata]14573e-159
XP_002870438 predicted protein [Arabidopsis lyrata subsp. lyrata]14152e-154

Swiss-Prot top hits (Blast detail)Scoree value
Q9SIB9 Aconitate hydratase 2, mitochondrial14624e-161
P49608 Aconitate hydratase, cytoplasmic13486e-148
Q6YZX6 Putative aconitate hydratase, cytoplasmic13486e-148
O04916 Aconitate hydratase, cytoplasmic (Fragment)13154e-144
Q42560 Aconitate hydratase 112941e-141

TrEMBL top hits (Blast detail)Scoree value
Q56WE8 Cytoplasmic aconitate hydratase (Fragment)14626e-160
B8BBF3 Putative uncharacterized protein13489e-147
B9FZG0 Putative uncharacterized protein13489e-147
B1Q486 Putative aconitase13434e-146
Q2PEW2 Putative cytoplasmic aconitate hydratase (Fragment)13391e-145

Arabidopsis top hits (Blast detail)Scoree value
AT2G05710.1 aconitate hydratase, cytoplasmic, putative / citrate hydro-lyase/aconitase, putative14632e-162
AT4G35830.1 aconitate hydratase, cytoplasmic / citrate hydro-lyase / aconitase (ACO)12957e-143
AT4G35830.2 aconitate hydratase, cytoplasmic / citrate hydro-lyase / aconitase (ACO)12957e-143
AT4G26970.1 aconitate hydratase/ copper ion binding12752e-140
AT5G54950.1 aconitate hydratase-related / citrate hydro-lyase-related / aconitase-related2411e-020

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  20%
 
64  80%

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