 |
Information for unigene UN15438
| FASTA Sequence |
| Unigene ID: UN15438 | Length: 726 |
SSR | | CGTTATTGTAAATGATAATTAAGTAAATTATCATGAAAGTCTTTTACAAAAACAAACGAGCAAATTCAAGTTTTTCTCTTCTCATA
TAATCCAATTATGCATTTAAAGGTAAAAGAAAACTTCATCAACAAGGAACTGGAGAAGAAGAAGAAGAAGAAATTGTTAGGGCTGA
CTGTAGATTTATCTTCCTCTCGAGAGAGCTTTCTCAGCAGTCTCCATCTCTTCAAGAATCCTCGCCTTCCTCTTCGCCGGGATCGG
AGCCGTCGGTCCAAAACTCACATAATGTCCAGACAAAGCATTCAACGCCGAGTAGATATCCCTGAAAGACGCTTTCCCGAGAAGAG
CTTTCTCCTTCCTGTACTTGGCAACCCACGAGTTCGACACTTCTCTCAGCTCAGCCACCGCGTCCGCCACATTCGGATCCGTCCTC
TCCATCGAGAGCGTCGTCCGAACTTTGGAGATCACCGCCGACGTATCTTTCACGTACTCTTCGTCTTCGGCGGCGGAAGCGGGCGA
CGGAGCTAGAAACGGGAGCGATTGCGTCAGTAGAAGCGTCGATGCGGCGGATAAGGAGAGTACATCGCGGCGGAGGAGGTTTTGGC
GACGTGGAGGAGGAAGAGGAGGAGATACGGAGGCGGTGATGACCGGTTTATGCTGCGGTGGAACAGGACTGGGTTTGAGAAGAGTA
GCTGTCGCTGAAGCTGAAGCCATTGTCGGAACGCGCCC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002889463 photosystem II family protein [Arabidopsis lyrata subsp. lyrata] | 744 | 7e-077 |
| NP_563687 photosystem II Psb27 protein [Arabidopsis thaliana] | 721 | 3e-074 |
| XP_002306756 predicted protein [Populus trichocarpa] | 535 | 1e-052 |
| XP_002302130 predicted protein [Populus trichocarpa] | 523 | 3e-051 |
| XP_002512708 Photosystem II 11 kDa protein precursor, putative [Ricinus communis] | 515 | 3e-050 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LR64 Thylakoid lumenal protein At1g03610, chloroplastic | 730 | 1e-076 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A9PK58 Putative uncharacterized protein | 535 | 9e-053 |
| B9H851 Predicted protein | 535 | 9e-053 |
| B9GT03 Predicted protein | 523 | 2e-051 |
| B9RG39 Photosystem II 11 kDa protein, putative | 515 | 2e-050 |
| B8ANZ3 Putative uncharacterized protein | 454 | 2e-043 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
