RadishBase

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Information for unigene UN15493

FASTA Sequence

Unigene ID:UN15493

Length: 1219

GGCCCTTTTCCAAACTCCACCAACCATTCAGTGAAGAAGAAGAAAAGGAAGCAAAAACGATGTCGTCTGAGGGGGATAAGTCAACA
AATTCAGCTCCTCCGGCGACACCGCCGCCGTATTTCTGGGGAGACATGCCGGAGGAAGAGTACTACACATCTCAAGGTGTGCGCAA
CACCAAATCCTACTTCGAAACACCCAACGGCAAGCTCTTCACGCAGAGCTTCCTTCCCTTAGATGGTGAGATCAAAGGGACGGTTT
ACATGTCTCACGGGTACGGATCCGACACGAGCTGGATGTTCCAGAAGATCTGCATGAGTTTCTCCAATTGGGGCTACGCCGTTTTC
GCCGCCGATCTTCTCGGTCACGGCCGCTCCGATGGCATCCGCTGCTACTTGGGTGATATGGAGAAAGTTGCAGCAACATCATTGTC
ATTCTTTAAGCATGTACGTTACAGCGAGCCGTATAAGCATCTCCCTGCTTTCCTCTTTGGTGAATCTATGGGAGGTCTTGCCACAC
TTCTCATGTACTTTCAATCCGAACCGGATACTTGGACCGGTTTGATCTTTTCGGCTCCTCTCTTTGTTATCCCGGAGGATATGAAA
CCGAGCAAGACTCATCTTTTCGCCTACGGTCTCCTCTTTGGCTTGGCTGACACGTGGGCTGCAATGCCGGATAACAAGATGGTTGG
CAAAGCTATCCATGACCCGGAAAAGCTCAAGATCATCGCAGCTAACCCACAAAGGTACACAGGGAAGCCTAGAGTTGGAACAATGA
GAGAGTTACTAAGGAAGACTCTATACGTGCAGGAGAACTTCGGGAGAGTAACTATTCCGTTTCTGACGGTGCACGGGACAGCTGAT
GGAGTGACGTGTCCTTCATCGTCAAAGCTACTATATGAGAAGGCATCTAGCGCTGATAAAACACTGAAGCTGTATGATGGGATGTA
CCATTCATTGATTCAGGGAGAGCCAGATGAGAATGTTGCAATCGTGTTGAAGGATATGAGAGAGTGGATTGATGAGAGGGTTGAGA
GGTATGGATCTAAGTAAAAGCAAGCTTGAAAGTTACATTTTGCGAGGAGAAATGTGCGTTGATATCATGGTTCATAGTGGTTGTTG
ATTCGAGTTGTTATGTTGTTTGTGTTTTATCCAAGAACATGACTTTTGGGATGTAATAATAAACTTATATATATCATGGATTACAG
AATCCCTTTCTAAAC

Annotation(GO term)

GenBank top hits (Blast detail)	Score	E value
XP_002891714 esterase/lipase/thioesterase family protein [Arabidopsis lyrata subsp. lyrata]	1586	4e-174
NP_175685 lysophospholipase 2 [Arabidopsis thaliana]	1577	5e-173
XP_002303266 predicted protein [Populus trichocarpa]	1456	5e-159
XP_002298118 predicted protein [Populus trichocarpa]	1443	2e-157
XP_002285258 PREDICTED: hypothetical protein [Vitis vinifera]	1390	2e-151

Swiss-Prot top hits (Blast detail)	Score	E value
Q8R431 Monoglyceride lipase	252	9e-021
O35678 Monoglyceride lipase	249	2e-020
Q99685 Monoglyceride lipase	235	8e-019
P28321 Serine hydrolase YJU3	142	5e-008
O94305 Probable serine hydrolase C5E4.05c	132	7e-007

TrEMBL top hits (Blast detail)	Score	E value
Q9C942 At1g52760	1577	3e-173
B9GWN9 Predicted protein	1456	3e-159
B9GKZ6 Predicted protein	1443	1e-157
A5AK33 Putative uncharacterized protein	1389	2e-151
C0PSC9 Putative uncharacterized protein	1188	4e-128

Arabidopsis top hits (Blast detail)	Score	E value
AT1G52760.1 esterase/lipase/thioesterase family protein	1577	2e-175
AT1G11090.1 hydrolase, alpha/beta fold family protein	657	8e-069
AT3G62860.1 esterase/lipase/thioesterase family protein	496	4e-050
AT2G39420.1 esterase/lipase/thioesterase family protein	484	9e-049
AT5G14980.1 esterase/lipase/thioesterase family protein	482	2e-048

EST library breakdown for ESTs in the assembly


11	1			3%


12	9			23%


9	4			10%


8	6			15%


10	9			23%


18	2			5%


6	5			13%


20	2			5%


19	1			3%

Unigene Members