 |
Information for unigene UN15530
| FASTA Sequence |
| Unigene ID: UN15530 | Length: 1071 |
SSR | | GGAGACAGAGATAAACCCTAACTCTCAAACAGAGCGGTTCTCGAACCAAAAGTACGACATTACCGCCGTATTAACTCGGAATCTCT
TCAGCCACCGTTCGATTGCTTCGTCTCCACCGAGATAATACTAATGGCTGAAGAAGAAGCTAAGGCAGTGGCTGTGGAAGAACCTA
AGGTGATGGCTGTAGAAGAAGCTAATAAGGGATTGGACTACATACCGGAGGTTATACTTAAGAAGAGGAAGAACAGGGATGAGCTT
GCCTTTATCAGGAAGAAGCAACTTGAGTTGGGCAATTTCGGTAAGAAGAAGAAGAAGAAAGTTGCTGATATCAAACGACCTGAAGA
CTTTGTGCTTGAGTTCAGGGCTAAGGAAATAGATCTTATCCGGATGAAGCAAAGGGTAAAGAGGCCAAGAGCATCTCCTCCACCAG
TAAAATCAAACCTCGTTTTCATCATACGCATACAAGGCAAGAATGATATGCACCCAAAGACCAAGAAGGTCCTCAACAGTATGCAA
CTGAGGAGCACTTTCACTGGTGTATTTGCCAAAGCAACTGATGGTTTGTTTCAAAAGCTTCTCAAAGTGCAGCCTTACGTCACTTA
TGGGTACCCGAATGGTAAGAGCGTTAAGGATCTTATTTTCAAAAAGGGATACACAATAATAGAAGGCAATCCTGTTCCTCTTACCG
ACAACAACATAATCGAACAGGCTCTAGGAGAACATGGTATTTTCTGCATAGAAGACATTGTGAATGAGATAGCAAGAGTTGGTGAT
CATTTCAGAGAGGTTATGAGATTCTTGGGACCCTTGAAACTCAACAAGCCAGAGGCTGGTGTCTTGCACGGTAAGAAACAAGTTTT
CAGCGATGGAGGAGATACTGGAAACCGTGAAGACAAGATCAATGATCTCATTGTCAAAATGAATTAGAAGCAGCCAGCAGAAGTCT
ATTTTACTATATTTTCCTTTAAAAGAAATCTGTATGAGGCTAAACGCACACCACTTGGAAAAAACGCTTTTGCAATTTTGATTGTT
TTTATTTGCTTCATAATGATTTAGTTGGCTTCAGAGCGG
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002889274 predicted protein [Arabidopsis lyrata subsp. lyrata] | 1141 | 1e-122 |
| NP_178190 60S ribosomal protein L7-1 [Arabidopsis thaliana] | 1102 | 4e-118 |
| XP_002297799 predicted protein [Populus trichocarpa] | 745 | 1e-076 |
| XP_002304722 predicted protein [Populus trichocarpa] | 734 | 2e-075 |
| XP_002527311 60S ribosomal protein L7, putative [Ricinus communis] | 724 | 3e-074 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SAI5 60S ribosomal protein L7-1 | 1102 | 2e-119 |
| P60040 60S ribosomal protein L7-2 | 509 | 1e-050 |
| Q9LHP1 60S ribosomal protein L7-4 | 507 | 2e-050 |
| O01802 60S ribosomal protein L7 | 502 | 7e-050 |
| P60039 60S ribosomal protein L7-3 | 501 | 1e-049 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WU42 Putative ribosomal protein L7 | 1102 | 3e-118 |
| B9GMC3 Predicted protein | 745 | 8e-077 |
| B9GVJ2 Predicted protein | 734 | 1e-075 |
| B9SMU2 60S ribosomal protein L7, putative | 724 | 2e-074 |
| B3TM16 60S ribosomal protein L7-like protein | 653 | 4e-066 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
