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Information for unigene UN15593

FASTA Sequence
Unigene ID: UN15593Length: 1151  SNP
GGGAAAGGATAAAAAAAAGACAAAAGCTGAAGAAGGAAAGCAATGGTATCTATTCTGCGGTCAGTGGCAACGACTACAGCCGCCGT
AGCCGCCGCGTCTGCGATTCCAATCGCGATCGCCTTCTCCTCCTCTTCTTCTTCCTCTACCAAATCTCAGTCTCCCAATCTCTCCT
TTTCCTCCCGATCGTTACCCCGCCGATTGGGTCTTTCACGAAGCTTCGCTAGCTCTCCGATGACGACCGTCCCCGTTTCCGATCGT
AATCTCCCTCAGGAGGATCGAGTCGTCATGCCTCAGCTTCTTACTGAGTTCATGGTCGATATGAAGTGTGAAGGTTGTGTTAACGC
CGTGAAGAGCAAGTTAGACACTGTTGAAGGGATTGAGAAAGTGGAGGTGGATTTGGCTAACCAAGTTGTGAGGATACTTGGATCTT
CCCCTGTTAAGGCTATGACTCAAGCTCTGGAGCAAACCGGTCGTAAAGCTCGTTTGATTGGCCAAGGTGTTCCTCAAGATTTCTTG
GTCTCGGCTGCAGTGGCGGAGTTCAAAGGTCCAGACATCTTTGGAGTGGTGAGATTTGCTCAGGTCAGTATGGAGCTTGCGAGAAT
CGAAGCCAACTTTACTGGTTTGTCTCCCGGGAAACACAGCTGGTGTATCAACGAGTATGGTGATCTCACAAACGGAGCAGCCAGCA
CTGGGAACTTGTACAACCCACTTCAAGATCTTACCAACACAGAGCCATTGGGGGACCTGGGAACACTAGAAGAGGCGGACCAGAGC
GGAGAGGCGTTTTACACGGGAAAGAAAGAGAAGCTCAAGGTTGCGGATCTAATAGGCCGAGCCGTGGTGGTCTACAAGACAGAGGA
TAAGAACTCAGGCCCCGGATTGACAGCTGCAGTGATTGCTAGAAGCGCAGGAGTTGGAGAAAACTACAAGAAGCTTTGTACTTGTG
ATGGTACTGTCATTTGGGAAGCTACAAACAGCGATTTCGTTAAGGTTTAATAACCAATAAAGATATTATTGACACTACTACGTTAC
GTGTTGTATCCACTTTACGACTTTGTTTTGGATCAAAATCACTTTGAAAAAATAAAAGCTTCTTGTATTGTACCAAATTCTGTTGT
GTAGTGTCTTTACTGAACGGCTTTAATAAGGCG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002892693 Cu/Zn-superoxide dismutase copper chaperone precursor [Arabidopsis lyrata subsp. lyrata]13973e-152
NP_563910 copper chaperone for SOD1 [Arabidopsis thaliana]13679e-149
AAY22970 copper/zinc superoxide dismutase chaperone [Arabidopsis thaliana]13598e-148
AAD52685 Cu/Zn-superoxide dismutase copper chaperone precursor [Arabidopsis thaliana]13283e-144
AAK91374 At1g12520/T12C24_28 [Arabidopsis thaliana]11439e-123

Swiss-Prot top hits (Blast detail)Scoree value
O14618 Copper chaperone for superoxide dismutase3182e-028
Q9JK72 Copper chaperone for superoxide dismutase3111e-027
Q9WU84 Copper chaperone for superoxide dismutase3064e-027
Q6PWT7 Copper chaperone for superoxide dismutase2966e-026
Q6FU61 Superoxide dismutase 1 copper chaperone1676e-011

TrEMBL top hits (Blast detail)Scoree value
Q9LD47 Cu/Zn superoxide dismutase copper chaperone like protein13676e-149
Q4ZJI5 Copper/zinc superoxide dismutase chaperone13595e-148
Q9SPD6 Cu/Zn-superoxide dismutase copper chaperone (Fragment)13282e-144
Q94A55 At1g12520/T12C24_2811436e-123
B9RBX1 Superoxide dismutase copper chaperone, putative10862e-116

Arabidopsis top hits (Blast detail)Scoree value
AT1G12520.1 ATCCS (COPPER CHAPERONE FOR SOD1); superoxide dismutase/ superoxide dismutase copper chaperone13674e-151
AT1G12520.2 ATCCS (COPPER CHAPERONE FOR SOD1); superoxide dismutase/ superoxide dismutase copper chaperone10682e-116
AT1G12520.3 ATCCS (COPPER CHAPERONE FOR SOD1); superoxide dismutase/ superoxide dismutase copper chaperone8621e-092
AT5G18100.1 CSD3 (copper/zinc superoxide dismutase 3); superoxide dismutase1291e-007
AT5G18100.2 CSD3 (copper/zinc superoxide dismutase 3); superoxide dismutase1291e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  13%
 
95  31%
 
124  25%
 
112  13%
 
63  19%

Unigene MembersMember information