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Information for unigene UN15598

FASTA Sequence
Unigene ID: UN15598Length: 751 SSR 
GGATACAAGGGTGTCTGAAGCAGACATGTGCTAGTTAACCACACGACGACGACGAGGAACTCTAAAGTAAACCCTAATTTCAAAGT
TTCGCCCTTAACATTGTTTTCAAAGCGGTTCTGCTGCGATGGAAGACGATACGTGGGCTGTTTCCTCTTCTGGTTCTTCCAGAAGC
TATCGATCACCGGCAACTACAGCTGCTAAGTATCAATCTGGTTCTTATCTAGATTCGGGAGACCTTGAAGAAGAAGAAGAAGAAGA
AGATGATGATGATGATGTTGTAGTGGATTACCCATGTCCGTTTTGCTCCGATGATTATGATTTAGTCGAGTTGTGTCACCATATCG
ACGAAGAGCATCAGCTTGAAGCTACCTATGGGCTATGCCCGGTTTGTAACAAAATGGTGAAGATGGACATGGTGGATCATATAACC
TCATATCATAGAGATGTCTTGAAGAGTGTGCAGAAGCAGACATCTTCTTACATGGACGATCCATACTCATCAGATAAACATCTTCG
ATCATTTCACGATGACTTTCCACCATATACGCATACTTCTAAACCCGTTGTTGCGGACCACTTTTTATCTTTCCTCAACAGTCCCC
CATTGCCAAAGCAAACCAAGCCTGTGCATGAGGTTGATTCAAGTGCAGAAGACAAGAATTTGACTGAGCTGATTCCTCTACAGTAA
AGACAGGACATCTTCACACCTTTATCGGATACTGACAACTTGAGAGCAATAAGTGTGAGTTGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ33794 unnamed protein product [Thellungiella halophila]6192e-062
NP_171775 protein DEHYDRATION-INDUCED 19-like protein 2 [Arabidopsis thaliana]5224e-051
XP_002889418 hypothetical protein ARALYDRAFT_470234 [Arabidopsis lyrata subsp. lyrata]4858e-047
NP_001184892 DEHYDRATION-INDUCED 19-like protein 2 [Arabidopsis thaliana]4275e-040
NP_192129 protein dehydration-INDUCED 19-5 [Arabidopsis thaliana]3863e-035

Swiss-Prot top hits (Blast detail)Scoree value
Q8GWK1 Protein DEHYDRATION-INDUCED 19 homolog 25581e-056
O04259 Protein DEHYDRATION-INDUCED 19 homolog 53861e-036
Q9FJ17 Protein DEHYDRATION-INDUCED 19 homolog 72202e-017
Q8VXU6 Protein DEHYDRATION-INDUCED 19 homolog 42131e-016
Q6NM26 Protein DEHYDRATION-INDUCED 19 homolog 62085e-016

TrEMBL top hits (Blast detail)Scoree value
B9GSE3 Predicted protein2974e-025
B9SAX0 Putative uncharacterized protein2661e-021
B9I9N5 Predicted protein2544e-020
C6T3G5 Putative uncharacterized protein2331e-017
B9N4N3 Predicted protein2302e-017

Arabidopsis top hits (Blast detail)Scoree value
AT1G02750.1 zinc ion binding5581e-057
AT4G02200.1 drought-responsive family protein3861e-037
AT4G02200.2 drought-responsive family protein3861e-037
AT5G49230.1 HRB1 (HYPERSENSITIVE TO RED AND BLUE); protein binding2202e-018
AT3G06760.1 INVOLVED IN: response to water deprivation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Drought induced 19 (InterPro:IPR008598); BEST Arabidopsis thaliana protein match is: HRB1 (HYPERSENSITIVE TO RED AND BLUE); protein binding (TAIR:AT5G49230.1); Has 133 Blast hits to 133 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 127; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).2131e-017

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  33%
 
81  33%
 
121  33%

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