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Information for unigene UN15626
| FASTA Sequence |
| Unigene ID: UN15626 | Length: 815 |
SSR | | GGGCATTTGTTTAGGTTTCTTCTTTCTACCGACGGAAAATTGGCGCTTTCAGGTTTCACCAGTACCAGGTTGTAGGAAGAGCTCTC
CCGACAGAGAAGGATGTCCAACCTAAGATTTACCGGATGAAGCTCTGGGCCACGAACGAGGTTCGTGCCAAATCCAAGTTCTGGTA
CTTCTTGAGGAAGCTGAAGAAGGTGAAGAAGAGCAATGGTCAGATGCTCGCCATCAACGAGATCTTTGAGAAGAACCCAACAACCA
TCAAGAACTTCGGAATCTGGTTGAGGTACCAGAGCAGGACTGGATACCACAACATGTACAAGGAGTACCGTGACACCACCTTGAAC
GGAGCCGTGGAACAGATGTACACCGAGATGGCGTCGAGACACCGTGTCAGGTTCCCTTGCATCCAGATCATCAAGACGGCTACCGT
TCCAGCCAAGCTTTTCAAGAGGGAGAGCACCAAGCAGTTCCACAACAGCAAAATTAAGTTCCCCTTGGTGTTCCGCAAGGTCAGAC
CACCAACCAGGAAGCTCAAGACCACCTACAAGGCCTCCAAGCCCAACTTGTTCATGTGAAAATAGTCTCTCTCTCTCTGATTGACC
GACGACTTCACATAAAACCTTTTTGGTTTGGGGTGTTAGAGAATCTTGATGATGGAAGTTATCTGCTGTTTTGTTTTTCTTTTCAA
GGATATTTTTCTTTATCAACAACATTTTAGTATTATTCATGGAACTAAACTCGACTTCGTCTTGGATTTTGTGGTTCTTGCTTCTT
CTTTATTTAGACAAAGTCCCTTTCTTTCTTGATTCCTAAGT
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_180995 60S ribosomal protein L18a-2 [Arabidopsis thaliana] | 920 | 4e-097 |
| XP_002882886 60S ribosomal protein L18A [Arabidopsis lyrata subsp. lyrata] | 886 | 3e-093 |
| XP_002317384 predicted protein [Populus trichocarpa] | 882 | 9e-093 |
| ABK93213 unknown [Populus trichocarpa] | 879 | 2e-092 |
| ACU14501 unknown [Glycine max] | 874 | 8e-092 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P51418 60S ribosomal protein L18a-2 | 920 | 2e-098 |
| Q9LUD4 60S ribosomal protein L18a-3 | 873 | 5e-093 |
| Q943F3 60S ribosomal protein L18a | 853 | 1e-090 |
| Q9ATF5 60S ribosomal protein L18a | 851 | 2e-090 |
| Q54MK8 60S ribosomal protein L18a | 488 | 2e-048 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A9PBF7 Predicted protein | 882 | 6e-093 |
| A9PA10 Putative uncharacterized protein | 879 | 1e-092 |
| C6SZ28 Putative uncharacterized protein | 874 | 5e-092 |
| A9P8L2 Predicted protein | 872 | 9e-092 |
| Q8L7K0 60S ribosomal protein L18A, putative | 871 | 1e-091 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G34480.1 60S ribosomal protein L18A (RPL18aB) | 921 | 1e-099 |
| AT3G14600.1 60S ribosomal protein L18A (RPL18aC) | 874 | 3e-094 |
| AT1G29965.1 60S ribosomal protein L18A (RPL18aA) | 872 | 6e-094 |
| AT1G29970.2 RPL18AA (60S RIBOSOMAL PROTEIN L18A-1); structural constituent of ribosome | 868 | 2e-093 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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