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Information for unigene UN15634

FASTA Sequence
Unigene ID: UN15634Length: 1091 SSR 
GGGAGGTCACGTCCAGGGCGAAAGACCCGATCCCGGTTACGGATCCGGATACGGTGGTCAGACGGAGGCTGAGTACGGCAGGAGAC
CTGAATCGGGGACGGAGACGGAGTATGGCCGGAGACCTGAGCAGAGTTACGGATCTGGTGGCTATGGAGGTAGATCGGAGGTTGAA
TCTGGTGGTTACGGTGGAAGAACGGAGGTTGAGTATGGCCGGAGACCTGATTCTGGATACGGTGGGAGATCGGAGGTCGAGTCTGG
TGGCTATGGTGGCAGATCGGAGTCTGAGTCTGGTGGTTACGGTGGAAGAACGGAGGTTGAGTATGGCAGGAGGCCTGAATCCGGAT
ATGGTTGCAGATCGGAGACTGAGACCGAGTATGAGCGTAAGCCTAGCTATGGGAGGTCTGAGGAGGAAGAGGAAGGAGGTTACAGG
AAGCCTAGCTATGGGAGATCTGAGGATCAGGTTGAGAGTTACATAAAGCCCAGCAGCTATGGGAGATCTGAGGAAGAGGAAGAGGG
AGGCTATAGGAAGCCTAGCTATGGAAGATCTGAGGAACAGGAGGAAGGGAGTTACAGGAAGCCTAGCTATGGCCGTCGCAATGATG
ATGATGATGATGATGGGGAGCGTAGGAACCGTTCTGGTGATTATGAGGAAGGGAGCTATGGCCGCAAGAAATATGGTGGAAATAAC
TCTGATGATGATGATGAGGAGAAGAAACAGCATCGTTACCAGCATCACCACCACCAGAGGCGTCGTGATGAAGACGATGACTAAAA
CACTTTCCCATGCTGGAGAGTCTTGTCCTGTTTAGCTTTATCTTACTAAATAAAAAAAGCTAAGGCATTTATCTTTGGATGTTGCT
GTTGTGTGTGTTTGATTCTCTTTAGATACAGCAGAGCCTGTGTCTGACTTTGTTTCTGGTTTATAATAAGATCTTGAACTGGTATC
GGGTCATCATCATCATGTAAACTGTTGGTACTCTGTGTTTCGTTTTTATGTTATGGAACTTTCCTCTTTTAGAGTTTAATAGTTTT
ATGGCTTCTGTTGTTTTGGTTTTGTCGATATTAATATTAAAAATCAAAAGTCATCGCCG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_568565 uncharacterized protein [Arabidopsis thaliana]7961e-082
AAN60241 unknown [Arabidopsis thaliana]7961e-082
XP_002870774 predicted protein [Arabidopsis lyrata subsp. lyrata]7728e-080
XP_002530006 hypothetical protein RCOM_0537780 [Ricinus communis]4412e-041
AAM97009 putative protein [Arabidopsis thaliana]3661e-032

Swiss-Prot top hits (Blast detail)Scoree value
Q9FKA5 Uncharacterized protein At5g395707966e-084
Q28181 Cyclic nucleotide-gated cation channel beta-11675e-011
P04929 Histidine-rich glycoprotein1318e-007
Q9LYJ9 DEAD-box ATP-dependent RNA helicase 461301e-006
Q8MP30 Uncharacterized histidine-rich protein DDB_G02745571282e-006

TrEMBL top hits (Blast detail)Scoree value
B9SVI7 Putative uncharacterized protein4411e-041
Q8L7C5 Putative uncharacterized protein At5g395703972e-036
B9N9R7 Predicted protein3756e-034
A9SVG4 Predicted protein2852e-023
Q2N2B2 RPGR ORF15 isoform (Fragment)2134e-015

Arabidopsis top hits (Blast detail)Scoree value
AT5G39570.1 unknown protein3988e-039
AT3G29075.1 glycine-rich protein2501e-021
AT3G07030.1 nucleic acid binding1829e-014
AT5G14610.1 ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding / protein binding1317e-008
AT5G61030.1 GR-RBP3 (glycine-rich RNA-binding protein 3); ATP binding / RNA binding1291e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  50%
 
81  50%

Unigene MembersMember information