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Information for unigene UN15656

FASTA Sequence
Unigene ID: UN15656Length: 1488 SSR 
GGACAACTTTTCAACACACCAAACACTTTGTTGTTACTTATTTGCTCACCAAAACTTGTCTACTTAACAAGCCTCCCAAATCTCAA
CAATTTCATTCACAAATCCATCTGTAATATCGAGAGATCATCGTAGAAAAACACAGATCACACTTTTTTAAAAAAAAAGAAGAAAA
AGGAGATGGATAATAACAATAACCAGCAAACGTTTTGGCAGTTCAGCGATCAATTGAGAGTCCTCCAAACGCCCCACAATCTTTCC
TTAAACGACTCCATCTGGAGCACCACCAACAAACGCACCGACGACCGCAGAAACTTCGAATATGACAACAACAACAACAAGGCTTC
TTCCGACATCAACAACAACAACAACGCTGCGAGCTGGAACAACTGGAAGTCTAGCTCCAACGGTTTCGGACCCATCGGATCAAAAT
CAACAACATCGACAAACGTCAATTTCAACCGCACCGACGACAACCCCTGGAAACTCAACAACGGAGATTTCAACAAGGGCATCTAC
TCCTCGCAGCCCAAGAGCTATGGCTTCAATTTCAAGAACAACAAGGGGATGATCATCGATCAAGATCATCATCAGATCCCCCAGAA
AGGAGTAGGGAAAAAGAACAGGAAGAATCAGAAGAATAACAACAACAATAAGGAAGATGACAAGAACACGAACGAGAAGAGGTTTA
AGACTCTTCCTCCCGCGGAGGCACTTCCGAGGAACGAGACCATCGGTGGTTACATCTTCGTGTGCAACAACGACACCATGGAGGAG
AATCTGAAGCGCCAGCTTTTCGGTTTGCCTCCGAGATACAGGGACTCCGTCAGAGCCATCACTCCCGGTCTTCCTCTCTTCCTCTA
CAACTACTCCACTCACCAGCTTCACGGTGTTTACCAGGCAGCTAGCTTCGGTGGGACTAACATTGAGCCCAACGCTTTCGAAGACA
AGAAATGTCCTGGCGAATCTCGGTTCCCTGCTCAGGTCAGGGCCATCACCAGGAAAGTTTGTTTGCCTTTGGAAGAAGATTCTTTC
CGTCCTATTCTCCATCACTACGACGGCCCTAAGTTCCGCCTCGAACTCACCGTCCCTGAGGTTCTTTCTCTTTTGGACATTTTTGA
TGAGCAAAACCCTTGAATTGGGATTTAAAAGAAAACAACAACAACATGAAGACAGACTAAAAAGTTCCCTTTTAACATATCCATAA
AGAGAGAGATCTTTACATATCATTCTACGTATATTAGTAATTGTCTCAAGAAAATGGTACTAGTTTATACACTTTTCGGGTTTAAT
TTCTTTTGTATTTTTACAAGAGAGGATGTGTTAAATATATTATATGAGATGGGGGCTACATTTGCGTGGGTGAGATGAACAAAAAA
CAAATCATGTCTTTCACTTGTGTTTGTGTAAAGTAAATAAAGTTTCATGTGTTACAACCAAAACTGGCATAAATGAGGATGAACTT
GATTCATTTATGTATTTTTTTTTACT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_568600 DCD (Development and Cell Death) domain protein [Arabidopsis thaliana]9541e-100
XP_002870594 hypothetical protein ARALYDRAFT_493778 [Arabidopsis lyrata subsp. lyrata]9451e-099
ACU18902 unknown [Glycine max]9111e-095
BAB08438 unnamed protein product [Arabidopsis thaliana]8966e-094
XP_002518847 n-rich protein, putative [Ricinus communis]8787e-092

Swiss-Prot top hits (Blast detail)Scoree value
P37707 B2 protein7753e-081
Q54L50 Putative uncharacterized protein DDB_G02869011732e-011
Q54D75 Probable cyclin-dependent serine/threonine-protein kinase DDB_G02925501722e-011
Q54SZ6 Putative uncharacterized protein DDB_G02821331722e-011
Q6XHA7 Probable serine/threonine-protein kinase roco91713e-011

TrEMBL top hits (Blast detail)Scoree value
Q8RXN8 Putative uncharacterized protein9547e-101
C6TAQ0 Putative uncharacterized protein9117e-096
Q9FHX9 Genomic DNA, chromosome 5, P1 clone:MJC208964e-094
B9RYM8 N-rich protein, putative8785e-092
C6T7F9 Putative uncharacterized protein8732e-091

Arabidopsis top hits (Blast detail)Scoree value
AT5G42050.1 FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Development and cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27090.1); Has 5084 Blast hits to 2870 proteins in 85 species: Archae - 0; Bacteria - 24; Metazoa - 270; Fungi - 58; Plants - 157; Viruses - 8; Other Eukaryotes - 4567 (source: NCBI BLink).11481e-125
AT3G27090.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Development and cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42050.1); Has 642 Blast hits to 564 proteins in 35 species: Archae - 0; Bacteria - 2; Metazoa - 12; Fungi - 0; Plants - 155; Viruses - 0; Other Eukaryotes - 473 (source: NCBI BLink).6848e-072
AT5G61910.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Development and cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G32910.1); Has 4051 Blast hits to 2453 proteins in 312 species: Archae - 1; Bacteria - 477; Metazoa - 1792; Fungi - 482; Plants - 477; Viruses - 8; Other Eukaryotes - 814 (source: NCBI BLink).2502e-021
AT5G61910.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Development and cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G32910.1); Has 4051 Blast hits to 2453 proteins in 312 species: Archae - 1; Bacteria - 477; Metazoa - 1792; Fungi - 482; Plants - 477; Viruses - 8; Other Eukaryotes - 814 (source: NCBI BLink).2502e-021
AT5G61910.3 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Development and cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G32910.1); Has 4051 Blast hits to 2448 proteins in 312 species: Archae - 1; Bacteria - 479; Metazoa - 1786; Fungi - 481; Plants - 479; Viruses - 8; Other Eukaryotes - 817 (source: NCBI BLink).2502e-021

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  50%
 
72  50%

Unigene MembersMember information