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Information for unigene UN15671
| FASTA Sequence |
| Unigene ID: UN15671 | Length: 1084 |
| SNP | GACCTTTGAGCACTGAGATTGAAGAGTTCTTGAGAGTTACTTGTTGTTGCTTTGTGGTCCAAGGCTACGGTCTGACGGAGACGCTT
GGAGGAACGGCAATGGGCTTCCCGGACGAGATGTGTATGCTAGGGACAGTCGGTATTCCGGCGGTTTACAACGAGATACGGCTTGA
GGAGGTGGCTGAAATGGGCTACGACCCACTTGGTGAAAATCCAGCAGGCGAGATCTGTATAAGAGGAAAATGCCTGTTTTCTGGTT
ATTACAAGAATCCCGAGCTTACTCAAGAAGTCATGAAAGACGGATGGTTCCATACAGGAGATATTGGTGAGATTCAATCAAATGGA
GTACTTAAGATAATTGATCGTAAAAAGAATCTTATCAAACTCTCTCAAGGAGAATACGTTGCTCTTGAGAACTTGGAAAATATCTA
CGGTCAAAACTCTCTTGTCCAAGATATATGGGTTTATGGAGACAGCTTCAAATCGATGCTTGTCGCGGTGATTGTTCCAAACCAAG
AAACCGTTAAACGTTGGGCTAAAGAACTTGGTTTTACTAAACCATTCGAAGAACTATGTTCTCTCTCTGAGTTACAAGAGCACATC
ATTTCAGAACTGAAGTCCACGGCAGAGAAGAACAAGCTAAGAAAGTTTGAGTACATCAAAGCAGTGACGGTGGAGACAAAACCTTT
CGATGTAGCGAGAGACTTAGTGACTGCAACGCTCAAGAACCGGAGGAACAACCTGCTCAAGTATTATCAGGTACACGTCGAGGAGA
TGTACCGAAAATTGGCGTCAGAGAAAATCTGAAAGTGTTGCGATGAGGTGTGTGCGCTAATATTGATAATTATGTTATATATAATA
CCAATAATTGATAGACATGAGCCTTATGGTTTCTGTAATGAAGATAAAGATGAGAAAACTCCTATCTTCGTTTGATACAGTTTAGT
ACGTCATGCATGTAAGTTGTAACAAGGGTAGTTGATGAAGCAACTTATTCATAAAAGTCTATGGTAGTAGACATTTAGTTCTCTTT
GTTAATGAACCTAAAAGGAAGGGTTAAGGTATTAACAAGTTAATGTCTTACC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_182246 long chain acyl-CoA synthetase 1 [Arabidopsis thaliana] | 1301 | 4e-141 |
| XP_002880289 long-chain-fatty-acid--CoA ligase family protein [Arabidopsis lyrata subsp. lyrata] | 1295 | 2e-140 |
| ABY77761 long chain acyl-CoA synthetase 1 [Brassica napus] | 1238 | 8e-134 |
| XP_002880290 long-chain-fatty-acid--CoA ligase family protein [Arabidopsis lyrata subsp. lyrata] | 1234 | 2e-133 |
| BAD94568 putative acyl-CoA synthetase [Arabidopsis thaliana] | 1095 | 3e-117 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q1ZXQ4 Fatty acyl-CoA synthetase B | 569 | 1e-057 |
| Q9ULC5 Long-chain-fatty-acid--CoA ligase 5 | 566 | 3e-057 |
| Q8JZR0 Long-chain-fatty-acid--CoA ligase 5 | 566 | 3e-057 |
| O88813 Long-chain-fatty-acid--CoA ligase 5 | 559 | 2e-056 |
| P41216 Long-chain-fatty-acid--CoA ligase 1 | 521 | 5e-052 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O22898 AT2G47240 protein | 1301 | 3e-141 |
| B0LUW1 Long chain acyl-CoA synthetase 1 | 1238 | 5e-134 |
| Q56WP3 Putative acyl-CoA synthetase (Fragment) | 1095 | 2e-117 |
| B9RNA5 Long-chain-fatty-acid CoA ligase, putative | 979 | 6e-104 |
| B9GSW4 Predicted protein | 961 | 7e-102 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G47240.1 long-chain-fatty-acid--CoA ligase family protein / long-chain acyl-CoA synthetase family protein | 1302 | 1e-143 |
| AT2G47240.2 long-chain-fatty-acid--CoA ligase family protein / long-chain acyl-CoA synthetase family protein | 1302 | 1e-143 |
| AT4G11030.1 long-chain-fatty-acid--CoA ligase, putative / long-chain acyl-CoA synthetase, putative | 786 | 8e-084 |
| AT1G64400.1 long-chain-fatty-acid--CoA ligase, putative / long-chain acyl-CoA synthetase, putative | 784 | 1e-083 |
| AT4G23850.1 long-chain-fatty-acid--CoA ligase / long-chain acyl-CoA synthetase | 774 | 2e-082 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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