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Information for unigene UN15677

FASTA Sequence
Unigene ID: UN15677Length: 974  SNP
GGATTCCTTCCGTCTTTAATAGATCGCAGTAGGAGCAAAGAAAGGGTTTAGTGAATCTAAAGGTCGAGAGAAAGATGAGCAGAGGA
AGCGGCGCAGGATACGATCGTCACATCACGATCTTCTCACCGGAAGGTCGTCTCTTCCAAGTCGAATATGCATTCAAAGCCGTCAA
AGCAGCAGGAATCACCTCCATCGGTGTTCGCGGAAAAGATTCAGTATGCGTCGTCACCCAGAAGAAAGTTCCCGACAAGCTTCTAG
ATCAGTCAAGCGTATCTCACCTTTTCCCTGTCACTAAGTACCTTGGCTTGTTAGCCACTGGCATGACAGCTGATTCAAGGTCTTTG
GTCACACAAGCAAGGAATGAGGCAGCTGAGTTTAGGTTCCAATACGGATACGAGATGCCTGCCGACATCCTTGCTAAATGGATTGC
AGACAAGTCACAGGTCTACACTCAACATGCTTACATGAGACCTCTTGGAGTAGTTGCCATGGTGCTGGGTATGGACGAAGAGAGAG
GACCCCTGCTTTACAAGTGTGACCCTGCTGGACACTTTTACGGTCACAAGGCAACTAGTGCAGGTATGAAAGAGCAAGAAGCAATC
AATTTCTTGGAGAAGAAAATGAAAGAGAACCCTGCCTTCACTTATGATGAAACAGTGCAGACTGCCATATCTGCCCTGCAATCTGT
TCTTCAAGAAGACTTCAAGGCAACTGAGATTGAGGTTGGAGTTGTGAGAGCTGATAACCCGATCTTCCGTTCCCTTGAAACGGAGG
AGATCGAGGAGCATTTGACTGCCATTAGCGAACGTGACTGATCACTTCGAAATCAGACTTTGCAATCTCTTCCTTTTGCTTTCATT
ATCTTTCTAAGAACATTCACATCTCATAGAAACTTGTTTCCGTCTGTGTTATGAATCTTGTGGTCTCCATTTGAACCTTCTGCTTT
CTCAGATCCTCTTTTATATTGTTTGCGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_178641 proteasome subunit alpha type-6-B [Arabidopsis thaliana]12297e-133
NP_198409 proteasome subunit alpha type-6-A [Arabidopsis thaliana]11778e-127
XP_002870436 hypothetical protein ARALYDRAFT_493620 [Arabidopsis lyrata subsp. lyrata]11751e-126
AAM12968 multicatalytic endopeptidase complex alpha subunit-like [Arabidopsis thaliana]11732e-126
CAA74025 multicatalytic endopeptidase complex, proteasome component, alpha subunit [Arabidopsis thaliana]11723e-126

Swiss-Prot top hits (Blast detail)Scoree value
O81147 Proteasome subunit alpha type-6-B12293e-134
O81146 Proteasome subunit alpha type-6-A11773e-128
Q9XG77 Proteasome subunit alpha type-611415e-124
O48551 Proteasome subunit alpha type-611254e-122
Q9LSU3 Proteasome subunit alpha type-610994e-119

TrEMBL top hits (Blast detail)Scoree value
D2D307 Proteasome subunit alpha type11561e-124
B9T3A4 Proteasome subunit alpha type11418e-123
B9RR89 Proteasome subunit alpha type11382e-122
A5ALB2 Proteasome subunit alpha type11311e-121
C6TNX9 Proteasome subunit alpha type11202e-120

Arabidopsis top hits (Blast detail)Scoree value
AT2G05840.1 PAA2 (20S PROTEASOME SUBUNIT PAA2); endopeptidase/ peptidase/ threonine-type endopeptidase12302e-135
AT5G35590.1 PAA1 (PROTEASOME ALPHA SUBUNIT A 1); endopeptidase/ peptidase/ threonine-type endopeptidase11782e-129
AT2G05840.2 PAA2 (20S PROTEASOME SUBUNIT PAA2); endopeptidase/ peptidase/ threonine-type endopeptidase11003e-120
AT3G51260.1 PAD1 (20s proteasome alpha subunit pad1); endopeptidase/ peptidase/ threonine-type endopeptidase3719e-036
AT1G16470.1 PAB1 (PROTEASOME SUBUNIT PAB1); endopeptidase/ peptidase/ threonine-type endopeptidase3611e-034

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
65  63%
 
102  25%
 
91  13%

Unigene MembersMember information