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Information for unigene UN15686

FASTA Sequence
Unigene ID: UN15686Length: 905 SSR 
CTCAGACCGAACACAGAAACAAGAAAAACAAAACACGAAGTTTTCGTTTGAGAGCTCAAAGGTTCCAGATTTCAAAAGAGCTTCTT
TTTTTTTTTTTTTTCCAGAATCATTTCTAGATCAATAGGCGGTTCTGTCATTGGTGAGAAGATGTCGGATCATCTGAGTTTATGTA
CGGATCGTCTCATAACGGGTGAGAGCTTGGAGTCAGAAAAGGATTGTGGAGAAAGTTCTTGTCCTCAAGGCGGCAGAGATGTGGCT
TCTTCTTCTTCTTCTTCGTCTGCGTCTGTCGATGAAGCTGAAGATGCCAAGAAGTACTATGCTGTTGTTGCTGCAGAAGAGGAACC
GCTTCTCCAGTCTGTTGAGTGCCGTATTTGCCAGGAGGAAGATATCACTAACAACTTGGAGGCTCCTTGTGCTTGCAATGGCAGTT
TGAAGTATGCGCACCGCAAGTGTGTTCAGCGTTGGTGTAATGAGAAAGGCGACATTGTCTGCGAAATATGCCGCCAGCCTTATCAA
TCTGGATATACAGCACCTCCACCTCCTCCTCCTGATGAAACTATAATTCACATTGGTGAGGATTGGGAGACTGGAGTTCACTTGGA
CTTGAGCGACCCGCGCATTCTAGCAATGGCTGGTTTTCTCCTGCCATGTTACATCATGGCATGGGCCATTGGAATTTTCCAGCGCC
GTAGGCAAAGACAGGAAGCTGCTGCTCTAGCTGCCGCGGAAGTTGCCTTCATGATACACGGTGGTGTGCCTCAACGCAGGGGACTT
CACTTTGCTTTATCGCCAGAGCAGCCGCTAGTGTCCAACCCAACACCAGTTTGATCCTTCTCCCAGCAATGATTCTCCGGTAAGAC
AAAACCCTGAACTGTTGTAAGAACTTGAACTTCCACCTACTTATG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ADA67984 RING-type E3 ubiquitin ligase [Brassica napus]6939e-071
XP_002875846 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]6543e-066
NP_850668 RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana]6373e-064
NP_850667 RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana]6373e-064
NP_190339 RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana]6373e-064

Swiss-Prot top hits (Blast detail)Scoree value
Q86YJ5 E3 ubiquitin-protein ligase MARCH91334e-007
Q3TZ87 E3 ubiquitin-protein ligase MARCH91334e-007
Q80TE3 E3 ubiquitin-protein ligase MARCH41272e-006
Q0P496 E3 ubiquitin-protein ligase MARCH41253e-006
Q9P2E8 E3 ubiquitin-protein ligase MARCH41244e-006

TrEMBL top hits (Blast detail)Scoree value
D2KC47 RING-type E3 ubiquitin ligase6936e-071
A9CEI2 Uncharacterized protein At3g47550.26372e-064
Q3E6V0 At3g475506372e-064
Q9SN83 Putative uncharacterized protein At3g475506372e-064
Q9FJJ6 AT5g62460/K19B1_75271e-051

Arabidopsis top hits (Blast detail)Scoree value
AT3G47550.3 zinc finger (C3HC4-type RING finger) family protein6371e-066
AT3G47550.2 zinc finger (C3HC4-type RING finger) family protein6371e-066
AT3G47550.1 zinc finger (C3HC4-type RING finger) family protein6371e-066
AT3G47550.6 zinc finger (C3HC4-type RING finger) family protein6371e-066
AT5G62460.1 zinc finger (C3HC4-type RING finger) family protein5277e-054

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  50%
 
121  50%

Unigene MembersMember information