 |
Information for unigene UN15691
| FASTA Sequence |
| Unigene ID: UN15691 | Length: 1115 |
| SNP | GGAGATTAGAATGAGCGGTGCGTTATTCAGAAATGTCGCCGCCGACACCGCACGGCTGATACGGCGGAACGCGGCTGCGGAAATTA
AGCAACTGCAATCCAGGCCTTATTTCCGCTCACCTCAGCTTCTCGGTAGAGCAAAGGAAACCGGAATCTCACTTCCGTCTTCTCCT
TCCGGTCTCTGTTCATCTGCGAAGGTGGGATTCGTAGGATGGTATCTTGGTATGGTGAAATCACGACCGGTCATCACCAAAAGTGT
CACTTCCTCGATTATTTACGTTGCCGCCGATTTGTCTTCTCAGACAATTTCGAAAAAATCTTCCGAGTCTTACGACTTGTTGAGAA
CAGCAAGGATGGGAGGATATGGTCTACTGGTCTTGGGTCCAACACTTCATTATTGGTTCAACTTCATGTCAAGACTCTTCCCAAAA
CAAGATTTGATCACTACCTTCAAGAAAATGGCCATGGGACAAGCGATCTACGGGCCTATCATGACCGTTGTTTTCTTCTCCTTGAA
CGCTTCCCTACAGGGGGAAAGTGGTTCGGATATAGTTGCAAGATTGAAAAGGGACGTAATCCCTGCAATGTTTAACGGTGTCATGT
ATTGGCCTCTTTGTGATTTTATAACATTCAGGTTCTTCCCCGTTCACTTACAGCCTCTTGTAAGCAACTCGTTTTCATATCTCTGG
ACAATCTACATGACGTACATGGCAAACCGCGAAAAACCTGCTGTGATTTCAGCTGAAACAATATAATACCTTTTACGCTATCTTGC
GCGTTGCATTGCCACTCTATTTAGATTTAGGTTGGTTGGTTATAAGATTTTATAAGACCACACATGTAATGAGTTTTGTTGCCGCA
ACTACCATTCATTTGTGTGATGTTATTATCATCTTTGATTGTTTGACACAGTATCACTAAAGGTTTGAGTGGTAGTTGCAGATGAA
ATGGATTAGTTCACAATGTCGTATGCGGTCTAAACGACTTTAAGTTTTCACGATCCACAAGTAATTTAATGCGGTATGGACATAAC
TATAAAGCAAACAGTCTGAATGTTTGGAAAATGTCTAGACTTTGTATCTTTGATGTTGGGTTAAGCTATTCTCTGAAGAGATC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002885942 hypothetical protein ARALYDRAFT_480374 [Arabidopsis lyrata subsp. lyrata] | 1014 | 8e-108 |
| NP_179092 protein Mpv17 [Arabidopsis thaliana] | 965 | 4e-102 |
| XP_002867146 hypothetical protein ARALYDRAFT_491288 [Arabidopsis lyrata subsp. lyrata] | 909 | 1e-095 |
| NP_567940 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein [Arabidopsis thaliana] | 887 | 4e-093 |
| CAA19872 putative protein [Arabidopsis thaliana] | 774 | 5e-080 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q54FR4 PXMP2/4 family protein 4 | 260 | 9e-022 |
| Q66GV0 Protein Mpv17 | 216 | 1e-016 |
| Q2TXA2 Protein sym1 | 214 | 2e-016 |
| Q54XX9 PXMP2/4 family protein 2 | 192 | 7e-014 |
| Q9V492 Mpv17-like protein | 179 | 2e-012 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O82324 22 kDa peroxisomal membrane protein | 965 | 3e-102 |
| Q9FPH4 AT4g33900 | 887 | 3e-093 |
| B9SNC3 Protein SYM1, putative | 770 | 1e-079 |
| B9HMX4 Predicted protein (Fragment) | 768 | 2e-079 |
| B9GHW2 Predicted protein (Fragment) | 760 | 1e-078 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G14860.1 peroxisomal membrane protein 22 kDa, putative | 1040 | 3e-113 |
| AT4G33905.1 peroxisomal membrane protein 22 kDa, putative | 887 | 2e-095 |
| AT5G43140.1 peroxisomal membrane 22 kDa family protein | 605 | 8e-063 |
| AT5G19750.1 peroxisomal membrane 22 kDa family protein | 253 | 5e-022 |
| AT3G24570.1 peroxisomal membrane 22 kDa family protein | 151 | 3e-010 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
