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Information for unigene UN15731

FASTA Sequence
Unigene ID: UN15731Length: 1184  SNP
GGACCCCTTCCGTCATCATCTCTCCATTTCCTGAATCTCAAGAGTCAAGATGCACACCAATGCAGCAGACTCAGAGGTAACAAGCC
TCTCTGCTTCATCGCCCACTAGATCTCCCCGTCGACCAGCCTACTTCGTGCAATCTCCTTCGCGTGACTCGCACGATGGAGAGAAA
ACCACAACATCGTTCCACTCAACTCCCGTCCTCAGCCCGATGGGATCTCCTCCGCACTCTCACTCCTCCTCCAGCCGCTTCTCCAA
GATCAACGGCTCCAAGCGCAAACCGCTCGGTGGAGACAGGAAGTTCGCAATGATCGAAGAGGAAGGTTTGCTCCATGATGGTGACA
GAGAAGATAAAGGTTTGCCTCGTCGTTGCTATGTCTTAGCCTTCGTTGTTGGATTCTCCTTGCTCTTCGCTTTCTTCTCTTTGATC
CTTTATGCAGCTGCTAAGCCTCAGAAGCCTAAGATCTTAGTCAAGAGTATAACATTTGAGGAACTTAAGGTCCAAGCTGGACAAGA
TGCGGGAGGTATAGGAACCGACATGATCACGATGAACGCGACTTTGAGAATGATGTACCGTAACACGGGGACATTCTTTGGTGTTC
ATGTTACTTCTTCTCCCATCGATCTGAGTTTCTCTCAGATCACTATTGGTTCTGGAACTATTAAGAAATTTTACCAATCAAGAAAA
AGCCAAAGAACAGTGATAGTAAATATGATTGGAGACAAGACTCCTCTCTACGGAAGTGGTTCTACCTTAGTGCCACCACCACCTCC
TGCACCAATTCCAATAAAGAGCAGCAAGAAGAAGAAAGGACCCATCGTGATCGTCGAGCCACCGGCACCTCCTGCTCCGGTGCCGA
TGAGGTTAAACTTCACCGTTAGATCTCATGCTTACGTGTTGGGAAAATTGGTTCATCCCAAGTTCTACAAGAGAATCGTGTGTTTG
ATTAACTTCGAACACAAGAAACTCAATAAACACATTGCACTCACGAACAACTGCACCGTCACTTCTGTTTGACAGTAAAGACAACC
CTTGACAGTGCAAGAATCGTATTGAGCAACGTGTCAAAATTATTGTCGGTGGGTTTAATATGTTCTTTAATTTATGTGAGTGGACT
ACGATCAATGGAGAATATTTTTGTCAATGATGCAGTGAATGAGAAAGATTCACATTTTTCATCAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_199100 uncharacterized protein [Arabidopsis thaliana]14744e-161
XP_002863727 hypothetical protein ARALYDRAFT_494732 [Arabidopsis lyrata subsp. lyrata]14726e-161
AAO42869 At5g42860 [Arabidopsis thaliana]14691e-160
XP_002891325 hypothetical protein ARALYDRAFT_473858 [Arabidopsis lyrata subsp. lyrata]10075e-107
NP_564495 uncharacterized protein [Arabidopsis thaliana]9923e-105

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9FMN3 Emb|CAB53482.114743e-161
Q84VY4 At5g4286014691e-160
Q9C636 Putative uncharacterized protein9922e-105
C5YB29 Putative uncharacterized protein Sb06g0338906713e-068
B9R7A4 Putative uncharacterized protein5478e-054

Arabidopsis top hits (Blast detail)Scoree value
AT5G42860.1 unknown protein14751e-163
AT1G45688.1 unknown protein9973e-108
AT1G45688.2 unknown protein5466e-056
AT2G41990.1 unknown protein3503e-033
AT3G24600.1 INVOLVED IN: antigen processing and presentation; LOCATED IN: MHC class I protein complex, membrane; CONTAINS InterPro DOMAIN/s: MHC class I, alpha chain, C-terminal (InterPro:IPR010579), Harpin-induced 1 (InterPro:IPR010847); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G35170.1); Has 181 Blast hits to 96 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 181; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).2993e-027

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
96  43%
 
102  14%
 
122  14%
 
114  29%

Unigene MembersMember information