 |
Information for unigene UN15754
| FASTA Sequence |
| Unigene ID: UN15754 | Length: 1118 |
SSR | SNP | TTTTTAGAAACGGAAAAAAATAATCTCCTCTTGGGCGGTCGTCTTCTGCAAGCTAAGCTCCTCTTTCGATTTCAGCAGAGAGATGT
CAGCGTACGAAAATGTTATTGGTGGGAAGCTAAAGCTGAAAGGGAAGGCTTTAGATGTGAAAGCAGGTGGAGTGAAGAAGAAGAAG
AAGAAGAAGAAGAAGAAGAAACAGGAAGAGCAAGCTCTTAAAATTACTGAACATGAACACATAGAAGGAGGAAACGAAGAAGCATT
GGGTAAATTGATTGAAGGAGGAGAAGAAGAAGATGAGGAGGGTAGGAGTGAAAAGGAGGATGGAAAAGTGCAACCTGATGATGATG
ATCTGTTAACGCCTGCGGAAAGACGGTACATAGAGCAGAAGCAGAAATTGGATGTGCAGAAACTAGCAAAGGAAGCGAACAAGTCT
CACCGTAACAGGATTGAGGATTTCAATCAGTATCTGGCTAACATGAGTGAGCATTACGATATCCCTAAAGTCGGACCTGGTTAAAT
CAACTTCTTCCTTGTCTCTCTCTGCTTATTTCAGTTTGGCATTGTCGAACAGCTACTGTTGTTGGATCTCTCGTGTTATTCCCATA
ACTTTGCTATTATATGGCCTCTGCTCTTTTCTATGATGGACACATTTTCGTGGAATGTTCACTCTTCCTCCTTCCTCCTGTATCTT
TCAGTTTCCAAACTTTTTCTATTTTCTCAATCACAAAACAATTTTTTTCAACAGTGGTCTATATGTGCTTGATGTTCGCAGTAACT
ACACCTCTCGGGATAGTACTTGGGATGATGATTTTCGCAGCGACCGGTTACGATGACCAGAACCCAAACGCATTGATAATGGAAGG
TTTATTAGGATCACTATCCTCAGGGATTCTAATATACATGGCCTTAGTTGACCTAATTGCACTTGATTTCTTCCATAACAAGATGT
TGACAACGGCCGGTGAATCAGGTTCTAAGCTGAAGAAACTTTGTTTTGTGGCATTGGTCTTGGGTTCTGCTTCTATGTCACTTCTT
GCTCTCTGGGCTTAAAAGAGGCAAAACTATACAAAAGTTACCATAGCAAAAATGTTATGTTTCTATATGAATATGGTTTTAACTTT
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002890189 hypothetical protein ARALYDRAFT_471877 [Arabidopsis lyrata subsp. lyrata] | 586 | 3e-058 |
| NP_564006 uncharacterized protein [Arabidopsis thaliana] | 575 | 6e-057 |
| CAE30488 zinc transporter ZIP6 [Arabidopsis halleri subsp. halleri] | 496 | 9e-048 |
| XP_002881083 zinc transporter ZIP6 [Arabidopsis lyrata subsp. lyrata] | 496 | 9e-048 |
| NP_180569 zinc transporter 6 [Arabidopsis thaliana] | 492 | 3e-047 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O64738 Zinc transporter 6, chloroplastic | 492 | 1e-048 |
| Q9SLG3 Zinc transporter 3 | 217 | 9e-017 |
| O23039 Zinc transporter 5 | 212 | 3e-016 |
| Q38856 Fe(2+) transport protein 1 | 186 | 3e-013 |
| O81123 Zinc transporter 1 | 185 | 4e-013 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FZ43 At1g16810/F17F16.8 | 575 | 4e-057 |
| Q70II8 Zinc transporter ZIP6 | 496 | 6e-048 |
| B9RHV1 7-dehydrocholesterol reductase, putative | 422 | 2e-039 |
| A2X965 Putative uncharacterized protein | 406 | 2e-037 |
| C5XZF3 Putative uncharacterized protein Sb04g029240 | 386 | 3e-035 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G16810.1 unknown protein | 576 | 2e-059 |
| AT1G16810.2 unknown protein | 576 | 2e-059 |
| AT2G30080.1 ZIP6; cation transmembrane transporter/ metal ion transmembrane transporter | 493 | 8e-050 |
| AT2G32270.1 ZIP3; zinc ion transmembrane transporter | 221 | 3e-018 |
| AT1G05300.1 ZIP5; cation transmembrane transporter/ metal ion transmembrane transporter | 216 | 1e-017 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
