Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN15757

FASTA Sequence
Unigene ID: UN15757Length: 638  SNP
GGAAAAACTAAAACCCTAGCTGCTTCCTCCTCTCACCTCTTCTCTTAGAACTCTGCGGCGAAAGATGACGGTTGAAGGAGTGAACC
CTAAGGCGTACCCGTTGGCCGATTCTCAGCTAGCCATAACAATCCTCGATCTTGTTCAACAAGCTACCAACTACAAACAGCTCAAG
AAAGGAGCTAATGAAGCTACCAAGACTTTGAACCGTGGTATCTCTGAGTTCGTGGTTATGGCTGCTGATGCTGAGCCTCTCGAGAT
CCTTCTTCATCTTCCTTTACTGGCTGAAGACAAGAATGTGCCGTATGTGTTTGTGCCATCGAAGCAAGCCCTTGGAAGAGCATGTG
GTGTGACAAGACCCGTGATTGCTTGCTCTGTTACATCAAACGATGCTAGCCAGTTGAAATCTCAGATTCAGCAGCTAAAGGATGCT
ATTGAGAAGCTCCTCATCTAAGGATGTGTTGGTGGAGTTATGAATGATGGGTCTTTCTCCATTTAATGGAAAAGGCTTTGACTACT
AAAGTGTGTTTGCGTGAGTTTTAGCCGTATCTGTTTTTGAAGTTTGTAATGCTTTTTATTTCATGTTTGTGTTGGTGCAAATCTAG
TCTTGAACAAGAACAATTATTTATAAATCGGGTTTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002872662 hypothetical protein ARALYDRAFT_490061 [Arabidopsis lyrata subsp. lyrata]6236e-063
ABL97959 ribosomal protein L7Ae-like [Brassica rapa]6228e-063
AAM64816 Ribosomal protein L7Ae-like [Arabidopsis thaliana]6155e-062
NP_192997 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein [Arabidopsis thaliana]6083e-061
XP_002873984 ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein [Arabidopsis lyrata subsp. lyrata]6074e-061

Swiss-Prot top hits (Blast detail)Scoree value
Q5XH16 NHP2-like protein 15151e-051
Q6P8E9 NHP2-like protein 15151e-051
Q21568 NHP2-like protein 1 homolog5141e-051
Q3B8S0 NHP2-like protein 15061e-050
P55769 NHP2-like protein 15061e-050

TrEMBL top hits (Blast detail)Scoree value
A1YN00 Ribosomal protein L7Ae-like6225e-063
Q8LBE4 Ribosomal protein L7Ae-like6154e-062
Q9SU26 AT4g12600/T1P17_1906082e-061
Q94AF6 AT5g20160/F5O24_506047e-061
Q8LCC7 At4g223806021e-060

Arabidopsis top hits (Blast detail)Scoree value
AT4G12600.1 ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein6091e-063
AT5G20160.1 ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein6053e-063
AT4G22380.1 ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein6036e-063
AT5G20160.2 ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein4201e-041
AT5G20160.3 ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein1896e-015

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
75  29%
 
122  12%
 
107  41%
 
111  6%
 
92  12%

Unigene MembersMember information