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Information for unigene UN15759
| FASTA Sequence |
| Unigene ID: UN15759 | Length: 1016 |
| SNP | GGACGAACCAATCTCCGCACGGTTCCTGTCGTAGCGCTCTCTTTCCTTTTGTTTCCTAACTTCCTAAGAGAACAAGTTGTATCAGT
TATTTTTCTTGTGAGATAAAAAAAAAGGGGGTGCAATGGCGAGGATAAAACCTCAGGCTCTGCTAAATCAAAGCAAGAAGAAGAAG
GGTCCTAGTCGGATAAGTATTTCTACAATTGTCGTGTGTAATCTCGTAGTTGCCGTAGTCGTACTCTCCTTGGTCACTACTTATCG
TCATTGGTCCCAGAGGTCAAGAAACACACTTGAAACCCAGAGTCATACTTTTGAGGACACAAATGCTGTATCACAACAAAAGAATT
ACGATCGTCCTGGCTATGCCGATATAAGCACATCAAAAGGTCTCATAACTGTGGAACTCTTTAAAGATGCTTCCCCTGAAGCTGTC
GACAAGTTTCTAGATCTGTGTAAAAAAGATCACTTCAAGGGAATGCCGTTTCAACGGGTTATAAAAAACTACTTGGTGCAAGCTGG
TCACTCCTCGAGCTCTATACCTGTAGAAGAATGGACTGCTAAAGGAAAGCTCCGTGGTCGCCTTGACACAAGCCCAAAACATGAAG
CATTCATGTTGGGGACACCAAAAATCAAAGGGAACAACAACAAGGACTTCGAGCTTCTGATCACAACGGCGCCAATCCCGGATCTG
AATGATCAGCTTATAGTGTTCGGAAGAGTCCTTAAGGGAGAGGATGTAGTACAGGAGATTGAGGAAGTGGATACAGATGAGCATTT
CCAGCCGAAATCGCAGATAGGGATCATTAGCATTGTATTGAAACGAGAATTATGAAATGAAAAATCTCTCTTGTTTAGTACCTGAC
GCCAAATCTTTTCTTCATACTCACCTGTTTGTCTAAATCCTTTTTTATAATCTTTATTTTACTGATTATTTCCTGTTGTTTTGTAA
TTTTAATTGATCTTTATCGAGGAAATAAGATAATTGGTTGTTCCTTTAATGGATTATAGTCTTCATAACT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002882485 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein [Arabidopsis lyrata subsp. lyrata] | 1039 | 8e-111 |
| NP_187319 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein [Arabidopsis thaliana] | 1037 | 1e-110 |
| XP_002316040 predicted protein [Populus trichocarpa] | 835 | 4e-087 |
| XP_002277818 PREDICTED: hypothetical protein [Vitis vinifera] | 822 | 1e-085 |
| XP_002311384 predicted protein [Populus trichocarpa] | 821 | 2e-085 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q94A16 Peptidyl-prolyl cis-trans isomerase CYP21-3, mitochondrial | 574 | 3e-058 |
| P0C1J1 Peptidyl-prolyl cis-trans isomerase-like 2 | 196 | 2e-014 |
| P0C1J0 Peptidyl-prolyl cis-trans isomerase cyp15 | 179 | 2e-012 |
| Q7SF72 Peptidyl-prolyl cis-trans isomerase-like 1 | 167 | 5e-011 |
| Q5KKX7 Peptidyl-prolyl cis-trans isomerase-like 1 | 165 | 8e-011 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9C835 Putative uncharacterized protein At3g66654 | 1037 | 1e-110 |
| B9HX13 Predicted protein | 835 | 3e-087 |
| B9HIP0 Predicted protein | 821 | 1e-085 |
| B6TNI1 Peptidyl-prolyl cis-trans isomerase CYP21-3 | 712 | 5e-073 |
| B8A1B4 Putative uncharacterized protein | 705 | 3e-072 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G66654.1 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein | 1037 | 6e-113 |
| AT3G66654.3 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein | 1037 | 6e-113 |
| AT3G66654.2 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein | 1037 | 6e-113 |
| AT2G47320.1 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein | 575 | 2e-059 |
| AT2G36130.1 peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative | 183 | 6e-014 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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