 |
Information for unigene UN15775
| FASTA Sequence |
| Unigene ID: UN15775 | Length: 1234 |
SSR | | AAAAGGGGTCTGCTTTTACACACTGACAAACTTTTTATACATATGAGTTATGAAAGTCTTACCTAGCAAAAAAAAAACACACACAT
ACACAAAACCACCCATTTGATGGATTAGAGACAGAATGGGCCTTATTAGTAGTAGAGGCTGTTTTAAGAAGGATCAAACATCACTC
TTAGCACACAACACACACAAGAATACTTAGAAAAACAAAATGGGCTATTACATTTCTTAATAACATTCTTCCAAATCATTTTATCA
TATCACGTATCATAAAAGGGCGGCATTTACTAGTTCCGGCTTCTGCATTTCTCCATCACCCTTGGAGCTAAGCCTATAGCCTCAGA
GCTCTTCATGATCCTCAGCTTCTTACAGGAGCATATAAACATTTCCCAAGGGACATCACCGACCAGCATCCAGTCACTGTCTTTGT
CTTCATAGGTAACAACATACTCAGAACCACGCAAGAGATCAGTTAAGCGACTCTCGTTTAACCCATCTCGACCACAACCTCCATGA
GACCCAAACTGACCAATAGTGAAGCAGCTGAACATCTTCTCAAGAGCAGAAGAGAGTTCAACGTAGCTCTTGTAAGTCTTGAGATC
GATTTTCCTCAAGTAAGGAGCACCTTCCATGCTCACTTTAACATACAAGCAAGGCTCAGGTCCAGACTTAGTTTCACAACCTTCAG
TCTCTGTGTTGTTATTATTATCACAACCATCTTGTTTCTGAGACTGAGAAGAAGCCATTGTGTTCTTCCTGAATGATCTAATCGGT
GGCCAACCCACAACTTGTGCCTTGGAAGCTGGAGCAGAGCTCTTCTTCTCCTTAACCGGAACGGCCGGTTTAATGTCTTTCACATC
AGTAGCGGATCCAGGGGAGAAGACCCATTTGGTAGACCCGTTAATGGGTCAGAAAACACCCTTTTGGCACCTGACACAGGACATGA
GCTCTTGAGTGATATGAACCCCCGTTGGTCAACTCGCTCCGGTGACTCAGAACCGGGTAAACCGAGTCTTAACTCGGTAGCCTTGA
AATTCAGAACGTCGTCGTTGTTGTTGTTGTCTTCGGTTTTGTCAGATATTATTTGTGTTGCTTCCATGGTTGGAAACTCAGACAAA
CCTATGTAATCATGCTCTGCTGCTGCTGCTGCGGATTCAGACATTCTCAAGTATGAATGTGGAGTAACTGTTGAAGCATATAGTGA
TTTAGAGAAAACAGTAAAACACTTTCTTCC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ33683 unnamed protein product [Thellungiella halophila] | 914 | 3e-096 |
| XP_002867425 phytochrome-associated protein 2 [Arabidopsis lyrata subsp. lyrata] | 867 | 1e-090 |
| NP_194637 auxin-responsive protein IAA27 [Arabidopsis thaliana] | 866 | 1e-090 |
| CBI36106 unnamed protein product [Vitis vinifera] | 677 | 1e-068 |
| XP_002516003 Auxin-responsive protein IAA27, putative [Ricinus communis] | 548 | 1e-053 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9ZSY8 Auxin-responsive protein IAA27 | 866 | 5e-092 |
| P0C132 Auxin-responsive protein IAA30 | 565 | 4e-057 |
| O24407 Auxin-responsive protein IAA16 | 555 | 6e-056 |
| Q38825 Auxin-responsive protein IAA7 | 504 | 5e-050 |
| Q5Z749 Auxin-responsive protein IAA21 | 460 | 7e-045 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| D3K0K2 Indole-3-acetic acid inducible 27 (Fragment) | 696 | 5e-071 |
| D3K0K3 Indole-3-acetic acid inducible 27 (Fragment) | 696 | 5e-071 |
| D3K0K4 Indole-3-acetic acid inducible 27 (Fragment) | 696 | 5e-071 |
| D3K0K5 Indole-3-acetic acid inducible 27 (Fragment) | 696 | 5e-071 |
| B9RQI4 Auxin-responsive protein IAA27, putative | 548 | 7e-054 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G29080.1 PAP2 (PHYTOCHROME-ASSOCIATED PROTEIN 2); transcription factor | 867 | 4e-093 |
| AT3G04730.1 IAA16; transcription factor | 556 | 4e-057 |
| AT3G23050.1 IAA7 (INDOLE-3-ACETIC ACID 7); transcription factor | 505 | 4e-051 |
| AT5G65670.2 IAA9 (INDOLE-3-ACETIC ACID INDUCIBLE 9); transcription factor | 449 | 1e-044 |
| AT2G22670.1 IAA8; transcription factor | 443 | 5e-044 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
